Pseudoalteromonas shioyasakiensis: KQ246_16290
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Entry
KQ246_16290 CDS
T08873
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psho
Pseudoalteromonas shioyasakiensis
Pathway
psho03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KQ246_16290 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psho03019
]
KQ246_16290 (orn)
03009 Ribosome biogenesis [BR:
psho03009
]
KQ246_16290 (orn)
Messenger RNA biogenesis [BR:
psho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KQ246_16290 (orn)
Ribosome biogenesis [BR:
psho03009
]
Eukaryotic type
Pre-60S particles
RNases
KQ246_16290 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QWV04861
LinkDB
All DBs
Position
3523430..3523975
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AA seq
181 aa
AA seq
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MSFHKSNLIWLDLEMTGLEPATDKILEIATVVTDSDLNILAEGPVIAIHQSDELLNGMDE
WCTTQHGQSGLTARCKASTFTEQDAIDQTLAFLKQWVPAGASPMCGNSIGQDRRFMNKYM
PELEDYFHYRNLDVSTVKELARRWKPDVLAQVNKKGSHLALDDIKDSIMELKIYQEKFFN
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttcataaatcaaatcttatctggctcgacctggaaatgactggcctcgaacca
gcaacagataaaatactcgaaattgccactgttgtcaccgacagtgatttaaacatcttg
gctgaaggccctgttattgctattcatcaaagtgatgaactgcttaatggcatggacgag
tggtgtacgactcagcacggacaatcaggtttaacagctcgctgtaaagccagcacattc
actgaacaagatgctattgatcaaacattggcatttttaaagcaatgggtacctgcgggt
gcttcgcctatgtgtggtaattctatcggccaagaccgccgctttatgaataagtacatg
cctgaattggaagactactttcactaccgtaaccttgatgtgagtaccgttaaagagctt
gcacgtcgttggaaacctgacgtactagcgcaagtgaacaaaaaaggttcacatctagcc
ctcgacgatatcaaagattcgatcatggaattaaagatttaccaagaaaaattctttaat
ttgtaa
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