Pseudoalteromonas shioyasakiensis: KQ246_16420 Help Entry KQ246_16420       CDS       T08873                                  Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism psho  Pseudoalteromonas shioyasakiensis Pathway psho02020   Two-component system psho02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:psho00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     KQ246_16420  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     KQ246_16420  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:psho03021]     KQ246_16420 Transcription machinery [BR:psho03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      KQ246_16420 BRITE hierarchy Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID Motif Other DBs NCBI-ProteinID:  QWV04877 LinkDB All DBs Position complement(3542524..3544020) Genome browser AA seq 498 aa AA seqDB search MRQSLQLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALDSNPLLEVEEADYNEESIG KNEQKAESDDVQVSASADEAPSEYEQESSDALNKDTVSDDLAMDVTWDEYMSAAPSTSSG PMPEDESIYQGASTETLHEYLMWQLQLTPFSPTDEAIAVAIVEAIDDSGILTVSCEDIVE SFNQNSDEEEIELDEVEAVLKRIQLFDPVGIGARSLQECLCIQLRQFDANTPYLAETKMV LSEHIELLASRDYRTLMKKTKLKENELKEVMTLIHSLNPKPADSIVREESEYVIPDVSVK KVKGRWVVELNPDSMPKIRVNSQYAAMSRSVKSSSDSQFIRSHLQEAKWFIKSLESRNDT LLKVTNCIVQQQQAFFEHGPEAMKPMVLNDVAEMVEMHESTISRVTTQKYMHTPRGIFEL KYFFSSHVSTENGGECSSTAIRALIKKLVAAENSAKPLSDSKIADILAEQGIKVARRTIA KYRESLAIPPSNQRKSLI NT seq 1497 nt NT seq  +upstreamnt  +downstreamnt atgaggcaatcattacagctgcgcatgggccagcaacttacaatgactccacaactgcaa caagctattcgtttgttgcagctcagtacattggatctccaacaagaaattcaagaggcg ctagatagtaaccctttacttgaagtggaagaagcggattacaacgaagaaagcatcggc aagaatgagcaaaaagctgaatctgacgatgtgcaagtcagcgcttctgcagacgaagca cctagcgaatatgaacaagaaagcagtgatgctctaaataaagacactgtaagtgacgat ttagccatggatgttacatgggatgagtacatgagtgccgctccatcaacatcatcaggg ccaatgccagaagatgaatctatttatcaaggtgcatcgaccgaaacccttcacgaatac cttatgtggcaattacagctaactccctttagtccgactgatgaagcgattgctgtggca attgttgaggctatcgatgactctggtattttaacggtaagctgtgaagatatcgtcgag agctttaatcaaaatagtgatgaagaagaaatcgaacttgatgaagtcgaagcggtccta aagagaattcaattgtttgatcctgtcggtattggggcgcgtagtttacaggaatgcctg tgtattcaacttcgccaattcgatgcaaacacgccatatttagctgaaactaaaatggtt ttatctgagcatatcgaattattagcgagtcgcgactatcgaactttgatgaaaaagact aagcttaaagaaaatgagcttaaagaagtaatgacgctaattcacagcttaaaccctaag cctgcggatagcatagtacgcgaagagtctgagtacgtcatacctgatgtatcagtgaaa aaagtaaaaggtcgctgggtggttgagttaaacccagatagtatgccaaagattagagtg aacagccaatatgcggctatgtctcgctctgttaaatcaagtagcgacagccaatttatt cgctctcacttacaagaagcaaagtggtttattaagagcttagaaagccgtaacgataca ctattaaaagtgaccaactgtatcgttcaacaacaacaagctttctttgagcatggccca gaagcaatgaagccgatggtgctaaatgatgttgctgaaatggtcgaaatgcatgaatcg acgatttcacgagtaacaacgcaaaaatatatgcatacccctaggggtatttttgagttg aaatatttcttctcaagccatgtcagcactgaaaatggtggtgagtgttcttcaacagca atacgcgctttaatcaagaagttagtcgctgcagaaaactcggctaaaccattgagtgat agcaaaattgcagatatattggctgagcaaggaattaaagtagctagacgtacaattgca aaatatcgtgagtctctagcaatacctccgtctaatcagcgtaagagtttgatttag

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