Pseudoalteromonas shioyasakiensis: KQ246_17350
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Entry
KQ246_17350 CDS
T08873
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
psho
Pseudoalteromonas shioyasakiensis
Brite
KEGG Orthology (KO) [BR:
psho00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psho02044
]
KQ246_17350
02035 Bacterial motility proteins [BR:
psho02035
]
KQ246_17350
Secretion system [BR:
psho02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
KQ246_17350
Bacterial motility proteins [BR:
psho02035
]
Pilus system
Pilus assembly proteins
KQ246_17350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
SesA
Phage_holin_3_6
CTV_P33
Ribosomal_L6e_N
Motif
Other DBs
NCBI-ProteinID:
QWV05026
LinkDB
All DBs
Position
complement(3732102..3733319)
Genome browser
AA seq
405 aa
AA seq
DB search
MNKIKTLDTFLWVGVNARGKKLQGELTGESIALVKAQLRRQGITPSKVKRKAKPLFGSRV
QKITAKDIALITRQIATMLMAGVPLIQSVEMIGSGSKNKSVARLMEGIGDDIKAGIPLSQ
ALRKHPRYFDDLYCDLVASGEQSGALDKIFDRVALYKEKAEALKSKIKKAMFYPIAVLVV
ALIVTSILLIFVVPQFQDIFNGFGAELPAFTLMVIGISEFMQENWWVILIAVVATGYAYK
EALLKSKKLRDANDRAILKLPIIGMILNKAAVARYARTLSTTFAAGVPLVDALDSAAGAS
GNAVYRYAILEIKAEVSSGNQMNWAMRNSKIFPDMVVQMVAIGEESGSLDGMLAKVATIY
EQEVDDAVDGLSSLLEPLIMAVLGVLVGGLIVAMYLPIFQLGSVI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaaataaaaacattagacaccttcctttgggttggagtaaacgctagaggtaaa
aagttacaaggcgaactcacaggagagagtatagctctagtcaaagcacaacttagaaga
caaggaataacaccttctaaagtaaagcgtaaagcaaaaccattatttggctctcgcgtt
caaaaaatcactgcaaaagatattgcacttattacccgacaaatagcgactatgctcatg
gctggagtaccactaattcaatcagttgaaatgataggctctggctcaaagaataaaagt
gtagccagactaatggagggtattggtgatgatataaaagcgggtattcctctctcacaa
gcattacgtaaacaccctcgttattttgatgatttatattgtgatttggtggcgtctggt
gaacagtctggtgccctcgataaaatatttgaccgcgtggccctttataaagaaaaagca
gaggctttaaaatcaaaaattaaaaaagccatgttctacccaatcgcggttttagtggtt
gctctaatagttacatctattctacttatatttgtagtgccgcaattccaagatattttt
aatggctttggtgcagagctgcctgcatttactttaatggtaattggtatttcagaattt
atgcaagaaaattggtgggtaatactcattgctgttgtcgctacaggctacgcttataaa
gaagcactacttaaaagtaaaaaactcagagacgctaacgatagagctattttgaagcta
cctattattggcatgattttaaataaagcggcagttgctcgctacgctcgtactttatca
acgacctttgctgccggtgtaccactggttgatgcactcgactcagctgcaggggcctca
ggtaatgcggtttatcgctatgctattttagaaattaaagccgaagtaagctcaggtaat
caaatgaactgggcgatgcgcaactcaaagatcttccccgatatggtggtgcaaatggtg
gctataggtgaagagtcgggttcactcgatggtatgcttgctaaagtggcaactatctat
gagcaagaagtcgatgatgccgttgatggtttatcgagcttacttgagccacttattatg
gcggttttgggcgtacttgtaggtggattaattgttgctatgtacttaccaatcttccaa
ttaggatcggtgatttaa
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