Pseudoalteromonas shioyasakiensis: KQ246_19795
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Entry
KQ246_19795 CDS
T08873
Name
(GenBank) IS3 family transposase
Organism
psho
Pseudoalteromonas shioyasakiensis
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Gene cluster
GFIT
Motif
Pfam:
rve
HTH_Tnp_1
rve_3
HTH_21
rve_2
HTH_23
HTH_28
HTH_Tnp_ISL3
HTH_29
Terminase_5
DivIC
DDE_Tnp_IS240
HTH_Tnp_1_2
DUF6899
GA_3
Motif
Other DBs
NCBI-ProteinID:
QWV06627
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Position
megaplasmid:join(544266..544509,544509..545422)
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AA seq
385 aa
AA seq
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MTKRKNKSYTTEFKQEAVALVTEQGYSVSEAAASLGITTKLIYNWKAKLEEQQAGNSLNE
DERAELKRLRKEVKDLKTEKENLKKGQRLLCERNEVKYQFIKENSQAYRVIKLCSAMKVS
RSSYYAWLTRPVKLITAEKLHFYRRAKALFKRSRESLGYRELCKSLRKEGFKITHYKTRK
LMAKLNLVVKQRVAYKVTTKRKHSDAVADNLLNQNFNPVAPNQVWAGDVTYLKTGEGWMY
LAVVMDLYSRRIVGWHIDKRMTTDLVMKAMIKAYNLRKPTKGLVFHSDRGSQYTSKRFRN
LLKQFGMRASMGDVGACWDNAVVERFFGSLKHDWLLKVAQPTREHMKNDVTEYMKYYNLE
RLHSANNDQLPVEYENSLRKVSGWS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacgtaaaaataaatcttatacaaccgaattcaaacaagaagcagttgctttg
gtaactgagcaaggctattcagtttcagaggccgcagcctctttagggatcaccaccaaa
cttatttataactggaaagctaaacttgaagagcaacaagcaggcaattcacttaatgaa
gatgagcgagccgagctaaaacgcctgagaaaagaagtgaaagatctcaaaacggagaaa
gagaatcttaaaaaaggccagcgccttctttgcgagagaaatgaagtaaagtatcaattc
atcaaagaaaatagccaagcttatcgagttataaaattatgctcagcgatgaaggtgagt
cgttcaagctattacgcatggctgacgcgtccagttaagcttataacggctgaaaagtta
catttttatcgcagggccaaagcactgtttaaacgcagcagagaaagcttaggctaccgt
gagttatgtaaaagcttacgcaaagaaggttttaaaataacgcactataaaaccagaaag
ttaatggcgaagctcaatttagttgttaaacaacgtgtggcttataaagtgacaaccaag
cgtaaacactctgatgcggttgcggataatttgcttaaccagaactttaatccggtagca
ccgaatcaagtttgggctggcgacgtgacttaccttaaaacaggcgaaggctggatgtac
cttgctgttgtaatggatttatattctcgtcgaattgttggctggcatattgataaacgt
atgacaactgatttagtaatgaaagccatgattaaagcttataacttaagaaaacctacc
aaaggcttggtatttcattctgacagagggtcccagtatacgagtaagcgatttcgtaac
ctgttgaagcagtttggtatgcgagcaagcatgggtgatgtgggagcgtgttgggataac
gctgttgttgaaagattctttggtagcttgaaacatgattggttgttaaaagtggctcag
ccaactcgtgagcatatgaaaaatgatgttactgaatatatgaagtattacaatctggag
aggctgcactctgctaataatgatcagttgccagtagagtatgaaaattctttaagaaaa
gtgtccggctggagttga
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