Pseudooceanicola spongiae: F3W81_00245
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Entry
F3W81_00245 CDS
T06866
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq00061
Fatty acid biosynthesis
pshq00071
Fatty acid degradation
pshq01100
Metabolic pathways
pshq01212
Fatty acid metabolism
pshq02024
Quorum sensing
Module
pshq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F3W81_00245
00071 Fatty acid degradation
F3W81_00245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
F3W81_00245
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pshq01004
]
F3W81_00245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pshq04147
]
F3W81_00245
Enzymes [BR:
pshq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F3W81_00245
Lipid biosynthesis proteins [BR:
pshq01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
F3W81_00245
Exosome [BR:
pshq04147
]
Exosomal proteins
Exosomal proteins of breast milk
F3W81_00245
Exosomal proteins of breast cancer cells
F3W81_00245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QOL79401
UniProt:
A0A7M3V2T8
LinkDB
All DBs
Position
49309..50835
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AA seq
508 aa
AA seq
DB search
MRMFTPPEVEDEVFLSFGHAIARNATALVRKPALILGDHQVSWAEFGDRVARTAGRLAAA
GQGPGTMVASLSENSAEHVVLYCAVVAVGACIVPLPVSATGEALQRMVADCGAELLFASA
SQRPIADQMGDVQVIDLDQLSDWVGKSAPAAPAEVTSDDFFNVIYSSGTTGLPKGIVHDH
RFRSRQLARIGRFGVTAEARMIISTPLYSNTTLFGMLPAIMLGATLVVMTKFDTLEFLEL
SQRHKLTHATLVPVQYTRLMAEPRFDEYDLSSYSCKFSTSAPLPPALIAQVIERWPGNLI
EVYGMTEGGLSTALNCRDFPDKWDTVGRPGDGVDMRVIDDTGAELPPGGYGEVVGRSGSM
MPAYLNLPDKSAELLWRSPQGEDFIRSGDMGRFDADGFLHLLDRKKDMIISGGFNIYAAD
LEAVLHRHPDVADAAVIAVPSEAWGETPLAFVVLRPGADCEAEVVKGWANAQLGKTQRIS
AVEVCTDLPRSEIGKVLKRELRAPYWKE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatgtttactccgcccgaggtcgaagacgaagtcttcctcagcttcggccacgcc
attgcccgaaatgccaccgctctggtccggaaacctgccctgatccttggggaccaccag
gtcagctgggctgagttcggggaccgggtcgcacgcactgccgggcgactggcggcggcg
gggcaggggcccgggaccatggtcgccagcctgtctgaaaactcggccgagcacgtcgtg
ctctactgtgccgtggtggcggttggagcctgcatcgtgcccttgccggtcagcgcgacc
ggcgaggcgctgcaacgcatggtcgcggattgcggggcggaactgcttttcgcctcggcc
tcgcaaaggccaatcgcggatcaaatgggagatgtgcaggtcatagatctcgaccagctc
tcggattgggtgggaaagagcgctcccgccgctccggccgaggtcacgtcggacgatttc
ttcaatgtcatctattcatcgggcaccacgggcctgcccaaggggatcgtccacgatcac
cgtttccgctctcggcagctggcacggatcggccgctttggtgtgacggcagaggcgcgg
atgatcatctcgacccctctttattccaacacgacgctgttcggcatgttgcccgcgatc
atgctgggcgcaacactggtggtgatgacaaagttcgatacgcttgagtttctggagctc
agtcagcgccacaagctgactcatgcgaccctcgtgcccgtgcaatatacgcgactgatg
gccgagccgcgttttgacgaatacgacctcagttcctacagttgcaagttctcgacctcg
gcgccactgccacctgcattgatcgcgcaggtgatagagcgctggcccggcaacctcatc
gaagtctacgggatgaccgagggtggcctgtccacggcgctcaattgcagggactttccc
gacaagtgggacacggtcgggcgaccgggggatggggtggatatgcgcgtcatcgacgac
accggagccgaactgccgccggggggctatggtgaggtggtcggccgttccggctccatg
atgccggcctacctcaacctgcccgacaaatccgccgagctgctctggcgcagtccgcag
ggtgaggatttcatccgttccggtgatatggggcgctttgacgccgacggcttcctgcat
ctgctggatcgcaagaaggacatgatcatttcgggcggcttcaatatctatgccgccgat
ctggaggcggtgttgcatcgccatccggatgtggccgatgcagcggtcatcgcggttccg
agcgaggcctggggggaaacgccgcttgcttttgtcgtgctgcgcccgggcgcggattgc
gaggctgaggtggtgaagggctgggccaatgctcagctgggtaagacgcagcggatctct
gcggtggaagtgtgtacagatctgccgcgcagtgagatcggcaaagtcctgaagcgcgag
cttcgcgcgccctattggaaagagtag
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