Pseudooceanicola spongiae: F3W81_00445
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Entry
F3W81_00445 CDS
T06866
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshq03000
]
F3W81_00445
Transcription factors [BR:
pshq03000
]
Prokaryotic type
Helix-turn-helix
LysR family
F3W81_00445
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
QOL79436
UniProt:
A0A7L9WJB4
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Position
94999..96204
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AA seq
401 aa
AA seq
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MIAEYYPNLRHMAGIVAIADTGSMSEAAVQLNLSQPALAQGLAKVERQMKGALFRRDARG
MRLSEAGEMFVARLRRGFDILRQASPVTKRSNLHQLVTMNQMLSLIAAVDHGGFRPAAAR
LGRAPSSLSRACRDLADQAGTPLFEVGPIGFRPTRQAEELARVFRLTLNEIHQAAADVRG
LQGDYAGRLAIGCLPLAQAVILPETLNRFAPEFPGISPQVVGGRYADLVQGLLNGDLDVL
VGALRREAVPGALTCGLTHVPLFSDGLVVAARAGHPLAGKAAILLEDLKQFPWVVPGVGA
PARGCYDQLFATGSAAPASVPKPVETEVYGVVGGLLRSSDRLAILARSQFPRDNGLKQLD
FELPDSQREIGLTYIEGWLPSVPQARFLSLLGDVFSETTQF
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgattgccgaatattatcctaatctcaggcacatggccgggatcgtggcgattgccgat
accggcagtatgtccgaagcggcggtgcagctgaacctgtcgcagcccgcgctggcgcag
gggctggcgaaggtcgagcggcagatgaagggcgcgctgtttcgccgggatgcccgtggc
atgcggctgagcgaggcgggcgagatgtttgtcgcgcgtctgcggcgtggctttgacatc
ctgcggcaggcctcgcccgtcaccaaacgcagcaatctgcaccagctggtcaccatgaac
cagatgctgagcctgattgccgccgtggatcatggcggctttcgcccggcggccgcacgg
ctggggcgagcgccgtcttcgctgagccgggcgtgccgcgaccttgcggatcaggcgggc
acgccgctgttcgaagtggggcccatcggctttcgcccgacccgtcaggccgaggagctg
gcgcgggtttttcgtttgaccctcaatgagatacatcaggcggcggcggatgtgcgcggc
ttgcagggggactatgccgggcggctggcgattggctgtctgccgctggcgcaggcggtg
atcctgcccgaaacgctgaaccgattcgcgccggaattccccggaatctcgcctcaggtg
gttggtgggcgctatgcggatctggtgcaggggttgctgaacggcgatctcgacgtgctg
gtcggggcgctgcggcgcgaggcggtgccgggcgcgctgacctgcggtctgacgcatgtg
ccgctgttctctgacgggctggtcgtggcggcgcgcgcggggcatcctctggccggcaag
gccgcgatcttgcttgaagatctcaagcaatttccgtgggttgtgcccggagttggggcg
ccggcgcgcggctgctacgaccagctgtttgccactggcagcgccgcgccggcgtcagtg
ccgaagccagtggaaaccgaggtttatggcgtggtcggcgggctgttgcgctcctccgac
cggctggccattctggcacgcagccagtttccccgcgataacggattgaaacaactggat
tttgaactgcccgacagccagcgcgaaatcggcctgacctatatcgagggctggttgccc
tcagtcccgcaggcgcggttcctcagcctgctgggcgatgtcttcagcgaaaccacgcag
ttctga
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