Pseudooceanicola spongiae: F3W81_01440
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Entry
F3W81_01440 CDS
T06866
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq02020
Two-component system
pshq02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F3W81_01440
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
F3W81_01440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pshq02035
]
F3W81_01440
Bacterial motility proteins [BR:
pshq02035
]
Flagellar system
Chemotaxis proteins
MCPs
F3W81_01440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP
EzrA
Cache_3-Cache_2
SQHop_cyclase_C
Vps53_N
Motif
Other DBs
NCBI-ProteinID:
QOL79609
UniProt:
A0A7L9WHA0
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Position
complement(310341..312209)
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AA seq
622 aa
AA seq
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MKPTRGLRIGVRIYSIIIVSIFASAALAFTMYDITVRNIYSMREAHLRDVVDSSASLVAA
LNQDVIDGKKTLEQAQAEAVDLLQKVRYDNGNYLFAFDYDTTVKAHGRSPDQVGARKGGA
LDPNGVDVYGSLLKAAQGGGGVVFYATQRTGGENSELLAKMSFSRAFTPWGWVIATGSYI
EDIEAQIANIRMRAYIAFGIGLLCLGVVSWFIARSVTGPINKLNARMRSLTQGDSSSEIP
FVQKADEIGEMARSVETFRQDIRHGAGLEREAARRKAEQEVAVSELARGLKLLATGDLSS
QLKDPFPDGYEALRSDFNGAVNKLADLIGTISETSVSLEHRGEEISSSAEVVARSSIESA
ASLEEAAAAIEELTSSVKLAAKGASEANVIATEARGNAAQSGEVVRRAVTAMGAIENSSG
KIAQIMDVIDDIAFQTNLLALNAGIEAARAGESGRGFAVVASEVRALAQRSSEAAREINV
LITESSNHVKEGVSLVNEAGVSLDQISGSVAKIASHISDIATSANEQSAGVSEINTSVAH
LDRTTQDNSAKFQHTLDSSRSMTQEAVSLRRALGQFKLARGTAKVVPFGAAAQVSTKPKP
VSKAVNASVATGTHNTDTWEDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaactaggggcctcaggatcggtgtccgtatctattcgatcatcatcgtctcg
atatttgcgagcgcagcgcttgcattcacgatgtacgatatcacagtcagaaacatctac
agcatgcgcgaagcacacctgcgtgacgttgtggattcatcagcaagcctggtcgcggcg
ttgaatcaggatgtcatagacggaaaaaagaccctggagcaagcgcaggcagaagctgtc
gatctgctccagaaagtgcggtatgataacggcaactacctcttcgcgtttgattacgac
accaccgtcaaggcgcatggtcggagccccgaccaagttggcgcgcgcaagggaggcgcc
cttgatcctaatggtgtggatgtctacggttcgttgttgaaagcggcgcaaggcggtggc
ggcgtggtgttttacgcaacgcaacgcaccggaggcgaaaattccgagctgctcgccaag
atgagcttctcgcgcgccttcaccccatgggggtgggtcattgcgacaggctcctatatc
gaggatatcgaagcccaaatcgccaatatcaggatgcgggcctatatcgcctttggcatc
ggtcttttgtgtctcggcgttgtcagctggttcattgcgagaagcgtcacaggacctatc
aacaaattgaatgcgcgcatgcgaagcctgacccaaggtgattcttccagtgaaataccc
ttcgttcaaaaagcggatgaaatcggggaaatggcgcgctcggtcgagactttccgccag
gatattcgtcatggcgcagggcttgagcgtgaggcagcgaggcgcaaggccgagcaggag
gtggcggtttcggaattggctcgtggcctgaagcttcttgcgactggagatttaagttcg
cagctgaaggaccctttccccgatggctatgaagcgttgcggagtgactttaacggtgca
gtgaataagcttgccgatctgataggcacgatcagcgagacctcagtcagtcttgagcac
cgcggcgaagagataagcagctcggctgaagttgtcgcccgcagttcaattgaatctgct
gcctctctcgaagaggccgccgcagcgatcgaagaactgacgtcctcggtcaaacttgcc
gccaagggagcgtcggaggcaaacgtcatcgcaaccgaagcgcgtggcaacgcggctcaa
agcggcgaggtcgtgcgccgggctgtcacggccatgggggcaatcgagaacagctcgggt
aaaatcgctcagatcatggatgttatcgacgatattgcatttcaaaccaacctcctcgca
ctgaatgccggtattgaagctgcaagagcgggtgagtccgggcgcggctttgctgtcgtt
gcctcggaagtgcgcgcactggcgcagcgatcatcagaggcggctcgcgaaatcaatgtg
cttatcacggagagtagcaaccacgttaaagagggcgtctctctggtcaatgaggccgga
gtgtcgctggaccagatttctgggtccgttgcgaagattgcctctcatatttcggatatc
gctacctcggcaaatgagcaatcagccggagtaagcgaaatcaatacatccgttgcgcat
ctggaccgcaccactcaagataattcggccaagtttcagcacacattggattccagccgt
tcaatgactcaggaagcggttagcctgcgtcgcgcacttgggcaattcaagttggcacgc
ggcactgcgaaggtggtgccattcggcgcagcagcgcaagtatccacaaaacccaagcct
gtctccaaagcggtgaacgcatcagttgcaaccggaactcacaatactgatacttgggaa
gatttttga
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