Pseudooceanicola spongiae: F3W81_03885
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Entry
F3W81_03885 CDS
T06866
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshq03400
]
F3W81_03885
Enzymes [BR:
pshq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
F3W81_03885
DNA repair and recombination proteins [BR:
pshq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
F3W81_03885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QOL80040
UniProt:
A0A7L9WLU9
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All DBs
Position
complement(827896..829389)
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AA seq
497 aa
AA seq
DB search
MTKAVILLPNQLFSDHPALLNPVKHVVLFEDPLFFGDPQYPANMHRQKLWLHRASMARYQ
QALVKQGLSAEIFPYDGQKGACLRLFENLTGQEITEVVMANPVDFIAERRLREAADDTGI
ELDILPSPGFLNSPADNLEWSQGRKRWFMADFYKSQRRRLDVLMENDQPLGGKWSFDEDN
RKKVPKTLLASLPWIDWPAHDAIDEAAKASVLAEFPNATGSLEKLYYPTSHAGAAAWFDQ
FLERRLDRFGDFEDAIVADESWLWHAILTPVLNIGLLTPRQVLDTTLTYAKRRDIPLNSL
EGFLRQIIGWREFMRATYDDLGVPMRRTNYWGHHRPMPHTFYDGTTGIAPLDGTIRRVLA
TGYCHHIERLMVLGGFMFMCEIDPDDIYRWFMEMFVDSYDWVMVPNVYAMSQHADGGLIT
TKPYFSGSNYIRKMSHWDKGPWTEVWDGLYWRFIFKHSGALAKNPRWAMMCRTAERMKPE
NKDCHLKIADKFLSQLN
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagccgtcatcctgctgccaaatcagttattttctgaccatccagccctgctg
aaccctgtaaagcatgtggtgcttttcgaagacccgctcttctttggcgacccacaatat
ccggcaaacatgcaccgtcagaagctttggctgcaccgcgccagtatggcgcgctatcaa
caggcgctggtaaaacaagggttgagcgcggagatctttccatatgacgggcaaaagggg
gcgtgcctgcggcttttcgaaaacctaacagggcaagaaatcacagaagtggtcatggcc
aacccggttgatttcattgccgaacgtcgccttcgtgaggccgccgatgacacaggcatc
gaacttgatatcctgccctctcctggctttctgaacagcccggccgacaatcttgaatgg
tcgcaaggccgtaagcgctggttcatggcagatttctataaaagccagcgccgccgcctg
gacgtgttgatggagaatgaccaacccctaggcgggaaatggagctttgacgaagacaac
cgtaagaaggtgccaaagacgttgctggcaagcttgccctggatcgattggcccgcccat
gacgccatcgatgaagccgcaaaagcaagcgttcttgccgaattcccaaacgcgacaggc
agtttggaaaagctctactatccgacctcgcacgcgggtgccgccgcttggttcgatcag
ttcctcgagcggcgacttgaccggttcggcgactttgaggatgctattgtcgcagatgaa
agctggctctggcatgccattctaacccctgtgctgaatatcgggctgctcaccccgcgc
caggtgctggacaccacgcttacttatgcaaagcgcagggatatccctctgaattcgctg
gaaggtttcctccgtcaaatcatcggttggcgtgaatttatgcgcgccacctatgacgac
cttggtgtccccatgcgccgtacgaactattggggccaccaccgccctatgccccatacc
ttctatgacggcacaaccggcattgccccgctagacggcacgatccggcgcgtgctcgcg
accggttattgccaccatatcgagcggctgatggtgcttggcggcttcatgttcatgtgc
gagatcgacccggacgacatttatcgctggttcatggagatgttcgtggacagctacgat
tgggtcatggttcccaatgtctacgctatgagccagcacgcagatggtgggttgatcacc
accaagccttacttctccggctcaaactacatccggaaaatgagccactgggacaaagga
ccttggacggaggtctgggacggattgtattggcgtttcattttcaagcattcaggtgcg
ctcgcaaagaacccgcgttgggccatgatgtgccgcacggcagagcggatgaagcctgaa
aacaaggactgccatttgaagattgccgacaaatttctgtcgcaactgaattga
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