Pseudooceanicola spongiae: F3W81_04295
Help
Entry
F3W81_04295 CDS
T06866
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pshq01002
]
F3W81_04295
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshq01011
]
F3W81_04295
Peptidases and inhibitors [BR:
pshq01002
]
Cysteine peptidases
Family C82
F3W81_04295
Peptidoglycan biosynthesis and degradation proteins [BR:
pshq01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
F3W81_04295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Sulfotransfer_3
Motif
Other DBs
NCBI-ProteinID:
QOL80112
UniProt:
A0A7L9WJF7
LinkDB
All DBs
Position
919267..920895
Genome browser
AA seq
542 aa
AA seq
DB search
MKVPLFCAIRPRLASSLGAIVLAAALSGSFVQPATAQVTLEAQAIAQSSAQNDDVAAYYR
ARDFAPIWTAAGPEAADRRSALLTAIDFAPLHGLPASRYDANALMAQMGAARTAKERGVL
DVALTRIYLRLARDLQTGMLTPSKVVPEIIREVPLRDVSQYLDGILSADPLAFVHSLPPH
NAEYVRLMKAKFQMERLMQAGGYGPTVPATQTMKPGQSGRAVIALRDRLMAMGYLKVSFT
STYDASIEAAVRQYQSDMGMNIDGVVGPATLGMINTSVEDRLKSVIVAMERERWLNRPRG
DRHVLVNLADFSAKIVDFDRVTFETRAVIGADKVGRRSPEFSDVMEFMIINPTWHVPRSI
VVKEYLPQLQQNPNAAAQLNVIDRNGQVVPRGAVDWRQFNARNFPFEMKQPPSNSNALGL
VKFMFPNANNIYLHDTPSKSLFARDSRAFSHGCIRLQDPFDFAYALLAPQMKDPKSFFQA
KLASGKETQVNLETPIQVHLIYRTAVTTPKGEIGFRDDVYGRDRAIWEALAAEGVTLAPV
RG
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgcccctgttttgtgcgatccgcccgcgtctggcctccagcttgggggccatc
gtgctggccgcggcgctgtctggcagtttcgtgcaacccgcaaccgcacaggtgacgctg
gaggcgcaggccatcgcgcagagctctgcgcagaatgacgatgttgcggcctattaccgg
gcgcgcgatttcgctccgatctggactgcggcagggcctgaggcggccgacagacgctca
gcgctgctgacggcgatcgattttgccccgctgcacggattgcccgcgtcgcgctatgac
gccaatgcgctgatggcgcagatgggggcggcgcgtaccgccaaggagcgtggcgtgctg
gatgtggcgttgacgcggatctatctgcggctggcgcgcgatctgcagaccggcatgctg
acgccaagcaaggtggtgcccgagatcatccgcgaagtgccgctgcgcgatgtctcgcaa
tacctcgacgggatcctgtcggcggatccgctggccttcgtgcattcgctgccgccgcat
aacgccgaatacgtccgtcttatgaaggcgaagttccagatggagcggctgatgcaggcc
ggcggctatggccctaccgtgcccgccacccagacgatgaagcccggtcagagtgggcgt
gcggtgattgcgctgcgcgaccgtctgatggcgatggggtatctcaaggtgtcgttcacc
tcgacctatgacgccagcatcgaagcggctgtgcgccagtatcagtcggatatgggcatg
aacatcgatggtgtggtcgggccggccacgctgggcatgatcaacaccagcgtcgaggat
cgtctgaaatcggtgatcgtcgcgatggagcgggaacgctggctgaaccggccgcgcggt
gaccgccatgtgctggtcaacctggctgacttcagcgccaagatcgtcgatttcgaccgc
gtgaccttcgagacccgcgccgtgatcggggccgacaaggtgggccgtcgcagccccgag
ttttccgatgtcatggaattcatgatcatcaacccgacctggcacgtgccgcgctcgatc
gtggtgaaggaatatctgccccagttgcagcaaaaccccaatgcggccgcacaactgaat
gtgatcgaccggaacgggcaggtggtgccgcgcggcgctgtcgactggcgccagttcaac
gcccgcaactttcccttcgagatgaagcagccgccctccaacagcaatgcgcttgggttg
gtgaagttcatgttcccgaacgccaacaacatctatctgcacgacaccccctccaagagc
ctgttcgcgcgggatagtcgtgcgttttcacatggttgcatccgtctgcaggacccgttc
gattttgcctatgcgctgctggcgccgcagatgaaggaccccaagagctttttccaggcc
aagctggcctccggcaaggagacgcaggtcaaccttgaaacgccgatccaggtgcatctg
atctatcgcaccgcggtcaccacgccgaagggcgagatcgggtttcgcgacgatgtgtac
ggtcgtgatcgcgcgatatgggaagcgcttgccgctgagggggtgactctggcaccggtt
cgcggctaa
DBGET
integrated database retrieval system
