Pseudooceanicola spongiae: F3W81_05815
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Entry
F3W81_05815 CDS
T06866
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pshq03009
]
F3W81_05815 (rimK)
Ribosome biogenesis [BR:
pshq03009
]
Prokaryotic type
ribosomal protein modification factors
F3W81_05815 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
Dala_Dala_lig_C
GARS_A
HDC
ATP-grasp
Synapsin_C
Motif
Other DBs
NCBI-ProteinID:
QOL80378
UniProt:
A0A7L9WLG6
LinkDB
All DBs
Position
1241999..1243423
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AA seq
474 aa
AA seq
DB search
MSEQASVTDPFKVGWEEWVALPGLGLPALKTKIDTGARTSALHAFDIEPFGPSQAPHVRF
SVHPIPGREDVTIACSAEVIDRREVTSSNGETEWRYVVRTDVVLGDRTWPIEITLTDRGS
MAYRMLLGRQALADEMVVVPGESCCQGVLDYSAYHSTAVQAAAPSRTLRIAVLSREGGAY
STRRIVEEGAARGHVIEVIDTTRCYMMINPLQPEIHYDGARLPRYDAVIPRIGTSVTAYG
AALMRQFEASGTYCVNGAEGIVASRDKLHAHQILSRSRIGMPATAFAASPKDTDNLIALV
GNAPLVVKLLESTQGKGVVLAETRRAAQSVISAFRGLKANFLVQHFVKEAGGEDIRCMVI
GGRVVATMLRRAESGEFRSNLHQGGSAEPVKITRAERDTAIRAARAFRMGLAGVDLLRAH
DGPQVLEVNSSPGFEGIEKATGRNIVAALFEEIEKKVRPTVARRRSPRAEAANR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggagcaagccagcgtgacagacccgttcaaagtaggctgggaagaatgggttgcc
ctgcccggactcggccttcccgcgttgaagaccaagatcgacacgggcgcccgtacatcg
gcgctgcacgcctttgacatcgagccattcggcccgtcgcaggccccgcatgtccgcttc
tcggttcatcccattccggggcgcgaagatgtcaccatcgcctgttccgccgaggtcatt
gaccgccgggaagtcacatcgtcgaatggcgagaccgaatggcgctatgtcgtccgcact
gacgtggtactgggcgacaggacgtggccgatagagatcacactgaccgaccggggcagc
atggcctatcgcatgttgctgggccggcaggcattggcggatgagatggtggtcgtccct
ggcgaaagctgctgtcagggcgtcctagactactccgcctaccactccactgccgttcag
gccgccgctccgtcgcgcacactgagaatagccgttctgagccgtgaaggtggtgcctat
tccacccgcaggatcgtcgaggaaggcgcggcgcgcggccatgtgatcgaggtcatcgac
acgacccggtgctacatgatgatcaaccccctgcagcccgaaattcactacgacggcgcc
cgcctgccccgctatgacgccgtcatcccccggatcggcacctccgtcaccgcctacggc
gcggccctcatgcgccagttcgaggcctctggcacgtattgcgtcaacggcgccgaagga
atcgtggcaagccgcgacaagctgcatgcccaccagattctgtcgcgcagccggatcggg
atgcccgccacggccttcgccgcatcccccaaggataccgacaacctgatcgcgctggtc
ggcaacgcaccgctggtggtgaaattgctggaaagcacccaaggcaagggcgtcgtcctg
gcagagacgcgccgcgcggcacaatcggtcatttcagccttccgcggacttaaggcaaac
ttcctggtccagcatttcgtgaaagaagccgggggggaggatatccgctgcatggtcatc
ggcggtcgtgttgtcgccacaatgctgcggcgggcagaatcgggcgagttccgctcgaac
ctgcatcagggtggcagcgctgaacctgtcaaaatcacgcgcgccgagcgggataccgcg
atccgtgccgcgcgggcgtttcgcatgggcctggcgggtgtagatcttctgcgcgcacat
gacgggccacaagtgttggaggtcaactcctcgcccggatttgagggcatcgagaaggcg
acggggcgcaacatcgttgcggctctcttcgaggaaatcgagaagaaggtccgccccacc
gtagcacgtcgccgctctccgcgtgccgaggcggccaatcgctag
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