KEGG   Pseudooceanicola spongiae: F3W81_06145
Entry
F3W81_06145       CDS       T06866                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pshq  Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:pshq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pshq03032]
    F3W81_06145
   03036 Chromosome and associated proteins [BR:pshq03036]
    F3W81_06145
   03400 DNA repair and recombination proteins [BR:pshq03400]
    F3W81_06145
DNA replication proteins [BR:pshq03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    F3W81_06145
Chromosome and associated proteins [BR:pshq03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    F3W81_06145
DNA repair and recombination proteins [BR:pshq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      F3W81_06145
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: QOL80429
UniProt: A0A7L9WJM6
LinkDB
Position
complement(1305334..1305606)
AA seq 90 aa
MANYTKKDLIRDLAAETVTFQATAQQIVDGVFNRISERSAAGDKVAIAGFGKFEVKTRAA
RTGRNPATGDPVEIPEKRVMKFTPTKASIS
NT seq 273 nt   +upstreamnt  +downstreamnt
atggcaaactacaccaaaaaagaccttatccgtgacctcgccgccgagactgtcaccttt
caggccaccgcgcagcagattgtggatggcgtgttcaaccggatttcggagcgttctgcc
gctggcgacaaggtggcgatcgcaggcttcggtaagttcgaggtcaagacccgtgccgcc
cgcaccgggcgcaacccggccaccggtgatcccgtcgagatccccgaaaagcgggtgatg
aaattcaccccgaccaaagcctcaatctcctga

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