KEGG   Pseudooceanicola spongiae: F3W81_07215
Entry
F3W81_07215       CDS       T06866                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pshq  Pseudooceanicola spongiae
Pathway
pshq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pshq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    F3W81_07215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pshq03019]
    F3W81_07215
Messenger RNA biogenesis [BR:pshq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     F3W81_07215
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QOL80621
UniProt: A0A7L9WJQ1
LinkDB
Position
complement(1507961..1509634)
AA seq 557 aa
MSNDRLIYLPLGGAGEIGMNAYVYGYGPAGKERLILVDIGVAFPDMETTPGVDLIFADVS
WLVKNKKRLEAVFITHAHEDHVGAIGHLYERLGAPVIHTRAFTANIARGKLAEYGVGDHA
VTTASVWPATTKAGPFTVGFLPISHSIPESSALVIDTPQGRIIHTGDFKLDLNPLVGEAF
DEELWREVSKPGVKALICDSTNIFSPNPGRSESEVGPEVQTLIAEAKGMLVATTFASNVA
RVRTLAEAGERAGRSICLMGRAMRRMVEASLETGVLTRFPKVVSTEEAREIPRENLMLIV
TGSQGERRAASAQLARGKFHGMQMQEGDTFLFSSKTIPGNEKGVIAIMNAFSEQGVDVID
DSNGRYHVSGHANRPDLEKMQDVVNPQMVIPMHGEHRHLREHAKMTLAKGRAAVVCVNGM
MLDLSGNQPKVAEYIESGRTYLDGSVQIGAMDGIVRDRIRMALNGHVTVTFVLDEQDEPL
GEPWCDLMGLPETGRSKSPLTDVLEQDLSQFIGRADAKTLMNDAKLEEALRRVVRNTSQD
EIGKKPEVTVVISRLSA
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgagcaacgaccggctgatctatctccccctcggcggtgctggggaaattggcatgaat
gcctatgtctatggctacgggcctgccggtaaggaacggctgatcctggtcgacattggc
gtcgccttcccggacatggagacaacgcccggtgttgatctgatcttcgccgatgtctcc
tggctggtgaagaacaagaagcggcttgaggccgtgttcatcacccacgcgcacgaagac
cacgtcggggccatcgggcacctgtacgagcgtcttggcgcccccgtcatccacacccgc
gccttcaccgccaatatcgcccgtggcaagctggcggaatacggcgttggcgaccatgct
gtcaccacggcgagcgtctggcccgcgaccaccaaggccggccccttcacggtcggcttc
ctgccgatctcgcactcgatcccggagagcagcgcgctggtcatcgacacgccgcagggc
cgcatcatccacaccggcgacttcaagctggacctcaacccgctggtcggcgaggcgttt
gacgaagagctgtggcgcgaagtgtccaagcccggcgtcaaggcgctgatctgtgactcc
accaacatcttctcgcccaaccccggccgctcggagtccgaggttggccccgaggtgcag
acgctgatcgccgaagcgaaggggatgctggttgcaaccaccttcgccagcaacgttgcc
cgggtgcgcacgctggccgaagctggcgagcgggcagggcggtcgatctgcctgatgggc
cgcgccatgcgtcgcatggtcgaagcttcgctggaaactggcgtcttgacccgctttccg
aaggttgtgagcaccgaagaggcgcgggaaatcccgcgcgagaacctgatgctgatcgtc
acgggcagccagggcgaacgccgtgcggcctccgctcagctggcgcgtggcaagttccat
ggcatgcagatgcaagagggcgacacgttcctgttctcctccaagaccattccgggcaat
gaaaagggcgtgattgcgatcatgaacgccttttcggagcagggcgtggatgtgatcgac
gacagcaatggccgttatcacgtgtctggccacgccaaccgcccggatctggaaaagatg
caggacgttgtgaacccgcagatggtcattccgatgcacggcgaacaccgtcacctgcgc
gaacacgccaagatgacgctggccaagggccgtgctgcggtcgtctgcgtcaatggcatg
atgctcgacctgtcgggcaatcagcccaaggtcgccgagtatatcgagagcggtcgcacc
tacctcgacgggtcggttcagatcggggccatggacggcatcgtgcgtgatcgtatccgc
atggcgctgaatggccatgtcacggttacgttcgtgctggacgagcaggacgagcctctg
ggggaaccctggtgcgatctgatgggcctgcctgagactggccgctccaaatcgccgctg
accgacgtgctggagcaggatctgagccagttcatcggtcgtgcggatgccaagaccctg
atgaacgatgccaaactggaagaggcgctgcgccgcgttgtgcgcaacacctctcaggat
gagatcggcaagaagcccgaagtgacggttgtcatttcccggttgtcggcctga

DBGET integrated database retrieval system