Pseudooceanicola spongiae: F3W81_07705
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Entry
F3W81_07705 CDS
T06866
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq03420
Nucleotide excision repair
pshq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F3W81_07705
03430 Mismatch repair
F3W81_07705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshq03400
]
F3W81_07705
Enzymes [BR:
pshq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F3W81_07705
DNA repair and recombination proteins [BR:
pshq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F3W81_07705
MMR (mismatch excision repair)
Other MMR factors
F3W81_07705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QOL80709
UniProt:
A0A7L9WKD7
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All DBs
Position
complement(1618018..1620441)
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AA seq
807 aa
AA seq
DB search
MSSYSEDDAFEAAATVPLSQRAMARVHPATPYLDDLNPAQREAVEALDGPVLMLAGAGTG
KTKALTSRMVHLLTTGRARPNEILSVTFTNKAAREMKLRMGRMLGEGVEGMPWLGTFHSI
CVKLLRRHAELVGLKSNFTILDTDDQIRLMKQLLAATNIDDKRWPARMLAGVIDSWKNRA
WIPSKVPASEASAFNNRGTELYDQYQRRLLELNAVDFGDLLLHVVTIFQTHEDVLQQYQR
WFKYILVDEYQDTNVAQYLWLRLLAGAHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFP
GAKVVRLEQNYRSTPHILAAASSVIAGNESRLGKDLWTEAKDGEKVRLIGHWDGDEEARW
VGDDIEAMQRGTRGMEPFSLDDMAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERLE
IRDAMAYFRLAVSPADDLAFERIVNTPKRGLGDKAQQKIQMTARENGVSLLDGARILLQD
KGLGGKAAGLLARFVEQMDRWHEIARLHTPGSLIEDGEAVILDEDRPRAPMGHVELAEIM
LDESGYTSMWQNDKTPEGPGRLENLKELVKALESFENLQGFLEHVSLIMDNESEQEGEKV
SIMTLHGAKGLEFPVVFLPGWEDGLFPSQRSMDESGQKGLEEERRLAYVGITRAEKVCTI
SFAGNRRVFGQWQSALPSRFIDELPDANVDVLTPPGLYGGGFGAAAAPANTIDAKVAAAD
GYNSPGWKRLQARANHRPVTQPRETRSTILDLSASSSHTVGERVFHQKFGYGDIVAIEGD
KLEVNFEKAGMKKVVAKFISSGEDVPF
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagctcttattccgaagatgatgccttcgaggccgccgccactgtcccgctgtcccag
cgggcgatggcgcgcgttcaccccgccaccccctatctggacgatctcaaccccgcgcag
cgcgaggcggtcgaggcgctggatggccccgttctgatgctcgcaggcgcgggcaccggc
aagaccaaggcgctgacctcgcgcatggtgcacttgctgacgacgggccgcgcccgcccg
aacgagattctctcggtgaccttcaccaacaaggccgcgcgcgagatgaagttgcgcatg
ggccggatgctgggcgagggggtcgagggcatgccctggctcggcactttccactcgatc
tgcgtcaagctgctgcgccgccacgccgagctggtcgggctgaagtccaacttcaccatc
ctcgacaccgacgaccagattcgcctgatgaaacaactgcttgctgcgaccaatatcgac
gacaagcgctggcctgcccggatgctggccggggtcatcgacagctggaaaaaccgcgcc
tggataccgtcgaaagtccccgcttccgaggcctcggccttcaacaaccgtggtaccgag
ctctacgaccaataccagcgccgcctgctggagctgaatgccgtcgatttcggcgacctg
ctgctgcatgtcgtgacgatcttccagacgcatgaggacgtgcttcagcaataccagcgc
tggttcaaatacatcctcgtcgacgaatatcaggataccaacgtcgcccagtacctctgg
ctgcggcttctggcaggcgcgcacaagaatatttgctgcgttggcgacgatgaccagtcg
atctatggctggcgcggtgccgaagttggcaacatcctgcggttcgagaaggattttccc
ggcgccaaggtggtccggctggagcagaactaccgctccacgccgcatatcctcgccgcc
gcgtcctccgtcatcgccggcaacgaatcgcgcttgggcaaggatctgtggaccgaggcg
aaagacggcgaaaaagtccgcctgatcggccattgggacggcgacgaagaggcccgctgg
gtcggcgacgatatcgaggcgatgcagcgcggcacccgcgggatggagcctttttccctc
gacgacatggcgattcttgtccgcgcctcgcaccagatgcgcgccttcgaggaccgattc
ctcacgatcggtctgccctaccgcgtcatcggcggcccgcgcttttacgaacggctcgag
attcgcgatgccatggcctatttccgcctcgccgtctcgcccgccgacgatctggcgttc
gaacgcatcgtcaacacgcccaaacgcggcctcggggacaaagcccaacagaaaatccag
atgacggcgcgcgaaaacggcgtctcgctgctcgatggcgcgcggatattgctgcaggac
aagggacttggcggcaaggcggccggtctgctggcccggttcgtcgaacagatggaccgc
tggcacgagatcgcgcgcctgcacacccccggaagcctcatcgaggacggagaggcggtc
attctcgacgaagatcgcccccgcgctcccatggggcatgtcgagctggccgaaatcatg
ctggacgaatccggctacacctcgatgtggcaaaacgacaagaccccagaggggccgggg
cgcctcgaaaacctcaaggaactggtgaaagcgctggaaagcttcgagaacctgcaagga
ttcctcgaacacgtcagcctgatcatggacaatgagagcgagcaggagggcgaaaaggtc
tcgatcatgaccctccacggcgccaaaggcctggaattcccagtcgtcttcctgccggga
tgggaagacggcctgttccccagccagcggagcatggacgaatcggggcaaaaaggcctc
gaagaagaacgccgcctcgcctacgtcgggatcacaagggctgaaaaggtctgcacgatc
tccttcgcaggcaaccgccgcgtctttggccagtggcaaagtgcgcttccctcccgcttt
atcgatgaacttccggacgcaaacgtcgacgttctgacgcctcccggactctatggtggc
ggattcggcgcggcagcggcccccgccaacaccatcgacgcgaaggtcgctgcagcagac
ggatacaattcgccgggctggaaacgtcttcaggcgcgggccaatcaccgcccggtcacc
cagccgcgcgaaacccgcagcacaatattggatttgagcgccagcagctctcacacggtg
ggagagcgcgtcttccaccagaagttcggctatggcgatattgttgcgattgagggcgac
aagctcgaggtgaattttgaaaaagccgggatgaaaaaggtcgtggccaagttcatctcc
agcggcgaagatgttccgttctga
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