Pseudooceanicola spongiae: F3W81_08565
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Entry
F3W81_08565 CDS
T06866
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshq03400
]
F3W81_08565
Enzymes [BR:
pshq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
F3W81_08565
DNA repair and recombination proteins [BR:
pshq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
F3W81_08565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
QOL80859
UniProt:
A0A7L9WKT4
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All DBs
Position
complement(1805099..1806442)
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AA seq
447 aa
AA seq
DB search
MFDVSGPNPTFVPGAADDKCQPFPYDGQKGACLRLFQNLRGQEITEVVMANPVDFVAERR
LREAADDTGIELDILPSPGFLNSPADNLEWSQGRKRRFMADFYKSQRRRLDVLMENDQPL
GGKWSFDEDNRKKVPKALLASLPWIDWPGHDAIDEAAKASVLAEFPNATGSLEKLYYPTS
HAGAAAWFDQFLERRLDRFGDFEDAIVADESWLWHAILTPVLNIGLLTPSQVLDTTLTYA
KRRDIPLNSLEGFLRQIIGWREFMRATYDDLGVPMRRTNYWGHHRPMPHTFYDGTTGIAP
LDDTIRRVLATGYCHHIERLMVLGGFMFMCEIDPDDIYRWFMEMFVDSYDWVMVPNVYAM
SQHADGGLITTKPYFSGSNYIRKMSHWDKGPWTEVWDGLYWRFIFKHSGALAKNPRWAMM
CRTAERMKPENKDCHLKIADKFLSQLN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgacgtgtcaggcccaaatccaaccttcgtgccaggcgcagcggatgacaagtgt
cagccctttccatatgacgggcaaaagggggcgtgcctgcggctttttcaaaacctaaga
gggcaagaaatcacagaagtggtcatggccaacccggttgatttcgttgccgaacgtcgc
cttcgtgaggccgccgatgacacaggcatcgaacttgatatcctgccctctcccggcttt
ctgaacagcccggccgacaatcttgaatggtcgcaaggccgtaagcgccggttcatggca
gatttctataaaagccagcgccgccgcctggacgtgttgatggagaatgaccaacctctg
ggcgggaaatggagctttgacgaggacaaccgcaagaaggtgccaaaggcgttgctggca
agcttgccctggatcgattggcccggccatgacgccatcgatgaggccgcaaaagcaagc
gttcttgccgaattcccaaacgcgacaggcagtttggaaaagctctactatccgacctcg
cacgcgggtgccgccgcttggttcgatcagttcctcgagcggcgacttgaccggttcggc
gactttgaagatgctattgtcgcagatgaaagctggctctggcatgccattctaacccct
gtgctgaatatcgggctgctcaccccgagccaggtgctggacaccacgcttacttatgca
aagcgcagggatatccctctgaattcgctggaaggtttcctccgtcaaatcatcggttgg
cgtgaatttatgcgcgccacctatgacgaccttggtgtccccatgcgccgtacgaactat
tggggccaccaccgccctatgccccataccttctatgacggcacaaccggcattgccccg
ctagacgacacgatccggcgcgtgctcgcgaccggttattgccaccatatcgagcggctg
atggtgcttggtggcttcatgttcatgtgcgagatcgacccggacgacatttatcgctgg
ttcatggagatgttcgtggacagctatgattgggtcatggttcccaatgtctacgctatg
agccagcacgcagatggtgggttgatcaccaccaagccttacttctccggctcaaactac
atccggaaaatgagccactgggacaaaggaccttggacggaggtctgggacggattgtat
tggcgtttcattttcaagcattcaggtgcgctcgcaaagaacccgcgttgggccatgatg
tgccgcacggcagagcggatgaagcctgaaaacaaggactgccatttgaagattgccgac
aaatttctgtcgcaactgaattga
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