Pseudooceanicola spongiae: F3W81_10140
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Entry
F3W81_10140 CDS
T06866
Symbol
choW
Name
(GenBank) choline ABC transporter permease subunit
KO
K02001
glycine betaine/proline transport system permease protein
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
F3W81_10140 (choW)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshq02000
]
F3W81_10140 (choW)
Transporters [BR:
pshq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
F3W81_10140 (choW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
SVM_signal
Motif
Other DBs
NCBI-ProteinID:
QOL81138
UniProt:
A0A7L9WNP1
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All DBs
Position
complement(2144796..2145632)
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AA seq
278 aa
AA seq
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MEWLTEHKIPVGDWASDFFDWLRDNFSGVVDALANGAEKLIDGLQWILQTPHPLVIIACF
VALTWVLQRNWKTCLFVALGFLFIINQDYWEATTQSLTLVISSCIVCMAIGVPIGIAAAH
RPRLYAFMQPVLDLMQTLPTFVYLIPAIVFFGIGMVPGLIATVIFVLPAPIRLTYLGVSS
TPTPLLEAAEAFGGTPSQTLRKVELPYALPQIMAGLNQTIMLSLSMVVVAALVGADGLGV
PVVRALNQVNTSLGFESGFVIVVVAIILDRMLRIGGRK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttggagtggctcactgaacacaagattcccgtaggggactgggccagcgatttcttcgac
tggctgcgcgacaatttctcgggcgtcgttgatgcgctcgccaatggtgcggaaaagctg
atcgacgggctgcaatggattttgcagacaccgcatccgctggtcatcatcgcctgtttc
gtcgccctgacatgggtgctgcaacgcaactggaagacctgccttttcgtggcactgggg
ttcctgttcatcatcaaccaggactactgggaggcaacgacgcagagcctgacgctggtg
atctcgtcctgtattgtctgcatggccataggggtgcccatcggcatcgccgccgcgcac
cggccgcgcctttacgccttcatgcagcccgtgcttgacctgatgcagacgctgcccacc
ttcgtctacctgatcccggccatcgtctttttcggcatcggcatggtgccgggcctgatc
gcgaccgtgatcttcgtgctgcccgcgccgatccggctgacctacctcggggtgtcctcg
acgcccacgccgctgcttgaggcggccgaggcctttggcggcacccccagccagaccctg
cgcaaggtagaactgccctatgctctgccgcagatcatggccggtctgaaccagaccatc
atgctgtcgctctccatggtcgtggtcgccgcgcttgtcggtgctgacggtcttggcgtg
cctgtcgtgcgcgcactgaaccaggtgaacacctccctcgggttcgagagtgggttcgtc
atcgttgtcgtggcaatcatccttgatcgcatgttgcgtatcggaggccggaaatga
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