Pseudooceanicola spongiae: F3W81_10145
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Entry
F3W81_10145 CDS
T06866
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
F3W81_10145 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshq02000
]
F3W81_10145 (choX)
Transporters [BR:
pshq02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
F3W81_10145 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
QOL81139
UniProt:
A0A7L9WLL9
LinkDB
All DBs
Position
complement(2145690..2146607)
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AA seq
305 aa
AA seq
DB search
MTKTLLTMTSALALTAGAAYANCEKVIFSDVGWTDITSTTSASKQVLEALGYDVDVKVLS
VPVTFASLDSDDVDVFLGNWMPAQNSAINPYLESGEIESVATNLTGTKYTLAVPAYTYEK
GLKSYADIAKFADDLDDKIYGIEPGNEGNAYLVSLADENKFGLKDFKIVESSEQGMLSMV
RRAVDKDEDIVFLGWEPHPMNANFDLKYLPGGEDFFGGEGVVNTVTRKGYVTECPNVGKF
LTNLKFTLPMENEIMGKILNDGEDADDASMAWMKANPDLVMSWVDGVTTVDGADGAAAVK
EKLGL
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagactctgctgaccatgaccagtgcgctggctttgaccgccggtgccgcctac
gcaaactgcgaaaaagtgatcttttcggatgtcggctggacggacatcacctccaccacc
tccgcctccaagcaggtgcttgaggctctgggctacgacgtcgacgtcaaggttctgtcc
gttcccgtgaccttcgcctcgctcgacagcgacgacgtcgatgtgtttctgggcaactgg
atgccggcgcagaacagcgccatcaatccctacttggaatcgggcgagattgaatcggtc
gcaaccaacctgaccggcaccaagtacaccctcgccgtgcctgcctatacctacgaaaag
ggcctgaaatcctacgccgatatcgccaagttcgccgatgatctggacgacaagatctac
ggcatcgagcccggcaatgaaggcaacgcctacctcgtcagcctggcggacgagaacaag
ttcggtctgaaagacttcaagatcgtcgaaagctccgagcagggcatgctctcgatggtg
cgccgcgcggtcgacaaggacgaggatatcgtcttcctcggctgggaaccgcacccgatg
aacgccaacttcgatctgaaatatctccccggtggcgaggatttctttggcggtgaaggc
gtcgtcaacaccgtgacccgcaagggctatgtcacggaatgccccaatgtcggcaagttc
ctgaccaacctcaagttcaccctgccgatggaaaacgagatcatgggcaagatcctgaac
gacggcgaagatgcagatgatgcgtcgatggcctggatgaaggcgaaccccgatctggtg
atgtcctgggttgacggcgtgaccacggtggatggtgccgatggcgctgccgccgtcaaa
gagaagctgggcctgtaa
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