Pseudooceanicola spongiae: F3W81_12160
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Entry
F3W81_12160 CDS
T06866
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq00550
Peptidoglycan biosynthesis
pshq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
F3W81_12160 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pshq01002
]
F3W81_12160 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshq01011
]
F3W81_12160 (dacB)
Enzymes [BR:
pshq01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
F3W81_12160 (dacB)
Peptidases and inhibitors [BR:
pshq01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
F3W81_12160 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pshq01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
F3W81_12160 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Beta-lactamase2
DUF5110
Motif
Other DBs
NCBI-ProteinID:
QOL81513
UniProt:
A0A7L9WNK3
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All DBs
Position
2588613..2590136
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AA seq
507 aa
AA seq
DB search
MTIQISRRMMLAGLFSSAALPAARPALADGPTTKIRPRHRPEGLMERMENGGYPTINMLL
ERNKISGHSAFALAALSDGQILEGHEAHQPLPPASVAKTLTTLYALDTLGPEYRFTTRLL
GTGPMEGGKLVGDLILAGGGDPDFDTDNLGELAAGLKAAGVTEVTGKFFYYGHSLPEARL
IDIEQPAHVAYNPGVSGLNLNYNRVHFEWKKVAGKWAITMDARAGKYRPDVTIASMALAD
RTGPIFTYNDRNGHDEWTVAESALGTADGARWLPVRRPAAYTAEVFQTLARAYGIVLDTP
EEMRDLPVDAFQLASYQSRPLSKVIKEMLYYSTNLTAEIIGLTASVARGVAPTSLRDSAQ
AMSVWAKQAFGLTEVSMVDHSGLEDDSRISTADLVTMLASRQAQDQLRPLLKDINLRKAG
KVIDKNRPMTVQAKTGTLNFVSGLAGYVVGPDGTAMAFAVLSGDIEIRKTLPMEQRERPP
GGRPWLARARNLQQDLIERWGGVYGTG
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacaattcagatttcccgacggatgatgctggctggcctgttcagcagtgccgccctg
cccgccgcccgccctgcgcttgccgatggtccgaccaccaagatccgcccccgtcaccgc
cccgaggggctgatggagcggatggagaatggcggctatcccaccatcaacatgctgctg
gagcgcaacaagatcagcggccacagcgcctttgcgctggccgcgctgagcgatggccag
atccttgaggggcatgaggcacaccagcccctgccccccgccagtgtcgccaagacgctg
acgacgctctacgcgctggacacgctggggccggagtatcgctttaccacccgtctgctg
ggcaccggcccgatggagggcggcaagctggtgggcgatctgatccttgcaggcggcggc
gatccggatttcgacaccgacaatctgggcgagctggccgccgggctgaaggcggcaggt
gtgacagaggtgacgggcaagttcttttactacggtcattcgctgcccgaagcgcggctg
atcgacatcgaacagcctgcgcatgtggcctataaccccggcgtctcggggttgaacctg
aactacaaccgggtgcatttcgagtggaagaaggtggccgggaaatgggccatcacgatg
gatgcccgcgctggcaaataccgccccgatgtgaccatcgccagcatggcgctggccgat
cgcaccggcccgatcttcacctacaacgaccgcaacggccatgatgaatggaccgtcgcc
gagtccgcccttggcaccgccgacggcgcgcgctggctgccggtgcgccgccctgccgcc
tataccgccgaagtgttccagacccttgcgcgcgcctatggcatcgtcctcgacacgccc
gaagagatgcgcgacctgcccgtcgatgccttccagctggccagctatcagagccgcccg
ctgagcaaggtgatcaaggagatgctgtattattcgaccaacctgacagccgaaatcatc
ggcctgacggcttcggtggcgcgcggtgtcgcgccgacctcgctgcgggactcggcgcag
gcgatgagcgtctgggccaagcaggccttcggtctgacagaggtctcgatggtcgatcac
tcagggctggaggacgactcgcgcatttccaccgcggatctggtgacgatgctggcctcg
cggcaggcgcaggatcagctgcgcccgctgctgaaggatatcaacctgaggaaagccggc
aaggtcatcgacaaaaatcgcccgatgacggtgcaggccaagaccggcacgctgaacttc
gtctcgggccttgcggggtacgtcgtggggccggacggcacggcgatggcctttgcggtg
ctctcgggcgacatcgagatccgcaagaccctgccgatggaacagcgcgaacgccccccc
ggcggcaggccctggctggcgcgcgcacgcaacctgcaacaggacctgatcgaacgctgg
ggcggcgtctacggcaccggctga
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