Pseudooceanicola spongiae: F3W81_13910
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Entry
F3W81_13910 CDS
T06866
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq03030
DNA replication
pshq03410
Base excision repair
pshq03420
Nucleotide excision repair
pshq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F3W81_13910 (polA)
03410 Base excision repair
F3W81_13910 (polA)
03420 Nucleotide excision repair
F3W81_13910 (polA)
03440 Homologous recombination
F3W81_13910 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pshq03032
]
F3W81_13910 (polA)
03400 DNA repair and recombination proteins [BR:
pshq03400
]
F3W81_13910 (polA)
Enzymes [BR:
pshq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F3W81_13910 (polA)
DNA replication proteins [BR:
pshq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F3W81_13910 (polA)
DNA repair and recombination proteins [BR:
pshq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F3W81_13910 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F3W81_13910 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Taq-exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QOL81821
UniProt:
A0A7L9WN59
LinkDB
All DBs
Position
complement(2947686..2950490)
Genome browser
AA seq
934 aa
AA seq
DB search
MTTQFGTGCHLHLIDGSAFIFRAYHALPPLTRKSDGVPIGAVAGFCNMLHRYVEGNTGPD
APTHVAVIFDKGSHTFRNDLYDLYKANRDAMPEDLRPQMPLTRRATEAFNIACKEIAGYE
ADDIIATLAVQAREAGGRVTIISSDKDLMQLVGGGVEMLDAMKNLRIDVEGVEAKFGVKP
DRVVDVQALAGDAVDNVPGAPGIGIKTAALLINEYGSLEELLDRAEEIKQPKRRQSLIDN
RAQIELSKKLVQLDCNTPLEFTLDDLEVRDPDPDVLLPFLAEMEFRTLSRRVAEQMGKDA
PEITEPSPAAAVSDAPEAPAIDDSAYEIVTDAAALQTWIDRAYARGHLALDTETTGLDDM
TADLVGFCLCIDAGHACYVPVGHKAEDGGEGLFASDTLAEGQMPLQTALDMLKPLLEDDS
ILKIGQNMKYDAKILRRYGVTVAPYDDTMLISYALNAGLHNHGMDALSERYLGHTPIPIK
ELIGSGKSQITFDRVAIDKAAKYAAEDADVTLRLWQLLKPRLHRERLATIYETLERPLSP
VLAQMEVNGIQVDRNTLSRMSNAFSQKMAALEAEIHELAGETFNVGSPKQLGEILFEKMS
LPGGKKGKTGAYATGADILEDLATEHDLPGRILDWRQLSKLKSTYTDALQEHINPETGRV
HTSYMQTGANTGRLSSSDPNLQNIPVRSEEGRRIREAFVAPEGKVLLSLDYSQIELRILA
HTAGIDALKQAFHEGQDIHAATASEMFGVPLDEMTPDVRRQAKAINFGVIYGISGFGLAR
NLRIPRAEAQGFIDRYFERFPGIREYMDETTAFAKENLYVETLFGRRIHTPEIAASGPRA
GFAKRAAINAPIQGTAADIIRRAMIRMPEAIANLPAKMLLQVHDELVFEVEESAADEVAE
VARRIMENAADPAVHIDVPLVVDAGKGMNWAEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcaattcggcaccggctgccatcttcacctgattgacggctccgccttcatc
tttcgcgcctaccacgccctgccgccgctgacgcgcaaatccgatggcgtgcccatcggc
gccgtcgccggcttttgcaacatgctgcaccgctatgttgagggcaacaccggccccgac
gcgcccacccatgtcgccgtaatcttcgacaagggcagccacaccttccgcaatgacctc
tacgatctctacaaggccaaccgcgacgctatgcccgaggatctgcgcccgcagatgccc
ctgacccgtcgcgcgaccgaggcgttcaacatcgcctgcaaggaaatcgcgggctatgag
gccgatgacatcatcgccaccctcgcagtccaagcgcgtgaggccggtggccgcgtcacc
atcatttcctcggacaaggacctgatgcagctggtcggcggcggggtcgaaatgctcgac
gccatgaagaacctgcgcatcgatgtcgaaggggtcgaggccaagttcggcgtcaaaccc
gaccgtgtcgtcgacgtgcaggcgctggcgggcgacgctgtcgataacgtccccggtgcg
cccggcatcggcatcaagaccgccgctctgctgatcaacgaatacggctcgctcgaagaa
cttctcgaccgcgccgaggaaatcaagcagcccaagcgccgtcagagcctgatcgacaac
cgcgcccagatcgagctgtccaagaagctcgtccagctcgattgcaacacgccgctggaa
ttcaccctcgacgatctcgaagtgcgcgaccccgatcccgatgtcctgctgcccttcctg
gctgagatggagttccgcaccctgtcgcgccgtgtcgccgaacagatgggcaaggacgcc
cccgaaatcaccgagccgagccccgccgccgccgtcagcgacgcccccgaagcgcccgcc
atcgacgacagcgcctatgagatcgtcaccgacgccgccgctctgcaaacctggatcgac
cgtgcctatgcgcggggccacctcgcgctcgacaccgaaaccactggccttgatgacatg
accgccgatctggtgggcttttgcctgtgcatcgacgccggtcacgcctgctatgtcccc
gttggtcacaaggccgaggacggcggcgagggcctctttgcctccgacacgctggccgag
gggcagatgcccctgcaaaccgcgctcgacatgctgaagccgctgcttgaggacgactcg
atcctcaagatcggccagaacatgaaatacgacgccaagatcctgcgccgctacggcgtc
accgtcgccccctatgacgacacgatgctgatcagctacgccctgaacgccggtctgcac
aatcacggcatggacgccctgtccgagcggtacctgggccacaccccgatcccgatcaag
gagctgattggctccggcaagtcccagatcaccttcgaccgtgtcgccatcgacaaggcc
gccaaatacgcagccgaggacgccgatgtcaccctgcgcctctggcagctgctgaaaccc
cgcctgcaccgcgaacgcctcgcgaccatttacgagacgctggaacgccccctctcgccc
gttctggcgcagatggaggtcaacggcattcaggtcgaccgcaacaccctgtcgcgcatg
tcgaacgccttttcccagaaaatggccgcgcttgaggctgaaattcacgaactcgcgggc
gagacgttcaacgtcggctcgcccaagcagctgggcgagatcctgtttgaaaagatgtcc
ctgcccggcggcaagaagggcaagaccggcgcctatgccactggtgccgacatcctcgaa
gacctcgcgaccgagcatgacctgccgggccgcatcctcgactggcgccagctctccaag
ctgaagtcgacctataccgacgcgctgcaggaacacatcaaccccgagaccgggcgcgtc
cacacctcctacatgcagaccggcgccaacaccgggcgtctgtcctcctccgatccgaac
ctgcagaacatccctgtgcgcagcgaggaaggccgccgcatccgcgaagccttcgtcgcc
cccgagggcaaggtgctgctatcgctcgactattcccagattgagctgcgcatcctcgcc
cataccgcgggcatcgacgccctgaaacaggcctttcatgagggccaggacattcacgcc
gccaccgcctccgagatgttcggcgtgcccttggacgagatgaccccagacgtgcggcgt
caggccaaggcgatcaacttcggtgtgatttacggcatctcgggcttcggcctcgcccgc
aatctgcgcattccgcgggccgaggcgcagggcttcatcgaccgctacttcgagcggttc
cccggcatccgcgaatacatggatgaaacgaccgccttcgcgaaggaaaacctctacgtc
gagacgctgttcggccgccgcatccacacgccggaaatcgccgcctccggtccccgcgcc
ggtttcgccaagcgcgccgcgatcaacgcgccgatccaaggcaccgccgccgacatcatc
cgccgcgccatgatccggatgcccgaggccatcgccaacctgcccgccaagatgctgctg
caggtccacgatgaactggtcttcgaggttgaggaaagcgccgcggacgaggtcgccgag
gtcgcccgccgcatcatggaaaacgccgccgacccggccgtgcacatcgacgtgccgctg
gtcgtggacgcaggcaaaggtatgaactgggccgaagcccactag
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