Pseudooceanicola spongiae: F3W81_14665
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Entry
F3W81_14665 CDS
T06866
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshq03000
]
F3W81_14665
Transcription factors [BR:
pshq03000
]
Prokaryotic type
Helix-turn-helix
LysR family
F3W81_14665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_24
MarR_2
HTH_28
HTH_Tnp_ISL3
HTH_AsnC-type
bHLH_NPAS4
PilJ
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QOL81960
UniProt:
A0A7L9WS90
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Position
3112855..3114042
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AA seq
395 aa
AA seq
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MKWNLRHLRVFLAVVHHASVSRAAEECHLSQPAVTQAIAKLEAGFAAPLFQHKAQGLFVT
DAGQALARRVRRALERIDQATAPISPRLAATATASQLQALIAVRELENFTLAAGKLGLSQ
PTVHRAVTRLEAEADKPLFERTAMGIRGTRACRLLAEAAQLAFAELDQAEMDLAEIAGSE
VGQIVVGAMPLSRSFMLSQAIIAFRESRPSVLIRVDEGPYDDLLAGLRRGEIDVLIGALR
DPLPIGDVVQEMLFEDDLILVAGPGHPLLAEAQPTLEQTADFPWILARKGTPSRGIFDQL
FASRPMPQSIVETGSMILMRQLLRQSDHIGFISRLQAAAEIELGLMVPLRIDLSGTQRPI
GITTRLDWIPTIAQKILIDEIKISVNLKTPSPAED
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaacctgcgtcacctgagggtctttctcgctgtggtccatcatgcctcggtg
tctcgcgccgctgaagagtgccacctttcgcagcctgcggtcacacaggcgattgcaaaa
cttgaagcgggtttcgctgcgcccctgtttcagcacaaggcccagggcttgttcgtcacc
gacgcgggacaggctcttgcacggcgggtaaggcgcgcgctggagcgcattgaccaggct
acggccccgatttcaccccgtcttgcggccaccgcaacggcgtctcagctgcaagccctg
atcgcggtgcgggagcttgagaacttcacactggcggctggcaaactgggactgtcccag
cccacggttcatcgcgccgtcacccgattggaggctgaggcggacaagcccctctttgaa
cggacggctatggggatccgcggcacacgtgcctgccgcttgctggctgaggccgcccag
ctcgccttcgccgagctggatcaggcggagatggacctggccgaaatcgccggtagcgag
gtcggccagatcgtcgtcggggcgatgccgctttcgcggtctttcatgctgtcgcaagcc
atcatcgcctttcgcgagagccgcccatcggtcttgatacgggtcgacgaaggcccctac
gatgatctgctggcgggcctgcgcagaggcgagatcgacgtcctgatcggtgccctgcgc
gaccccctgccgattggagacgtggtgcaggagatgctgtttgaggatgacctgatcctc
gtcgcgggccccggtcatccactgctggccgaggcccagccaacactggagcaaacggcg
gatttcccttggattttggcccgcaaaggtactccgtcgagaggcatcttcgatcagctg
ttcgccagtcggccaatgccgcaaagtatcgtggaaaccgggtcgatgatcctgatgcgg
cagctgctccgacagtcagatcacatcggcttcatttcacgccttcaggcagctgcggaa
atcgaattgggtcttatggtgcccctgcggattgatctgagcggaacacagcgaccgatt
ggcattacaacccgcctggactggattccaacgattgcgcaaaaaattctgattgatgaa
atcaagatttcagtaaatctaaaaacgccctccccagcggaagattga
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