Pseudooceanicola spongiae: F3W81_15035
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Entry
F3W81_15035 CDS
T06866
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshq03400
]
F3W81_15035 (addB)
Enzymes [BR:
pshq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F3W81_15035 (addB)
DNA repair and recombination proteins [BR:
pshq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
F3W81_15035 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
DUF7368
Motif
Other DBs
NCBI-ProteinID:
QOL82026
UniProt:
A0A7L9WRF1
LinkDB
All DBs
Position
3197722..3200643
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AA seq
973 aa
AA seq
DB search
MFERSETPRLFGIPPGADFPKELLRGLNARMQGRPPHEVARVQLVVNTRRMARRMRSIFD
AGPPALLPQVLLLTDLKGAEPIPPSISPIRRRLELIRLLSALLDAEPDLAPRAALYDLAD
SLAKLLDEMQGENVTPADIARLDVTDMSGHWARSLRFLDIVNSIPRDGDMPDPEQRQRRV
VESLVAEWQAHPPQHPIILAGSTGSRGATHLLMQAVARLPQGAVVLPGYDEHVPEAIWQR
LDEPLTGEDHPQFRFRKLMLGLGLEPSDVTPWVDDVPCNTARNRLVSLAMRPAPVTHQWL
EEGPALGDLDTPTRDITLVKATSPRAEAMAIALRLRKAAEDGQMAALITPDRMLTRQVSS
ALGRWGIVPDDSAGTPLQVTPPGRLLRQVARLFIAPPNAVDLLALLKHPLTHSGAKRGPH
LDLTRKLEIYLRRHARPMPDTDDLLAFAARQSGEFAPLWAEWLCTHVFDAAAPEPIPLAS
RVINHIALAEIVSRGCIEDATGTIWDKDAGIEAQRIMATLAEDAAYGSDFAARDYGDLVG
AIIANGEVRNPEEPHPHILIWGTLEARVQGADLVILGGLNEGSWPEAPTPDPWLNRQMRK
DAALLLPERRIGLSAHDFQQAIAAREVWLSRSIRSQDAETVPSRWLNRLTNLLSGLPDAG
PEALRRMEAKGNDWLAMARLIETPFTAPPATRPAPCPPVDARPRELWATDIRKLIRDPYA
IYAKRILRLSPMNPLMREPDALMRGIVSHEVIEAFVKGVCEDGLPNTPEALLQIASEVLE
REVPWGEARVLWHARLGRIAGWFTAHEAARQMEAAQIQYEQVGKAMIAGLGFTLAAKADR
IDLDHAGRVHLFDYKTGMPPSKDQQALFDKQLLLESAIAEREGFGTMGPRTVARAVYIGL
GSNPVEAPAPLDENSPGQVWEEFTELARAWLEPTRGYTARRAMFDMNDTSDYDLLSRHGE
WDVTQDPDKRTVE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacgctccgagacgccgcgcctgttcggcatccctcccggcgccgatttcccg
aaagaactgctgcgcgggctgaacgcgcggatgcagggccgtcctccgcacgaggtggcg
cgggttcaactggtggtcaacacccgccgcatggcgcgacgcatgcgcagcattttcgat
gccggtccgcctgcgctgctgccccaggtcctgctgctgacggacctgaagggcgcggag
ccgatcccaccctcgatctctcccatacgcaggcgtctggagctgatccgtctgctgtcc
gccttgctcgatgccgaaccggatctggccccccgcgccgcgctctatgatcttgccgac
agtctggccaagctattggacgagatgcagggcgaaaacgtgacgcctgcggacatcgcc
cggcttgatgtcaccgacatgtctggccactgggcgcgcagcctgcggtttctcgacatc
gtcaacagcattccccgcgacggcgacatgcccgatccagagcaacgccagcgacgtgtc
gtggaatcgctggtagccgagtggcaggcgcacccgccgcagcatccgatcattctggca
ggctcaacagggtcgcgcggtgcgacgcatctgctgatgcaggccgtcgcccgcctgccg
cagggcgcggtcgtcctgcccggctatgacgaacatgtccccgaggcgatctggcagcgg
ctagatgagcctctgacgggcgaggatcacccgcagttccgctttcgcaaactgatgctg
gggctgggattggaaccctcggacgttaccccctgggtcgacgacgtgccctgcaacacg
gcgcgcaaccggctggtgtcgctggccatgcgccccgcccccgtgacgcaccagtggctt
gaggaaggcccggccctcggcgatctcgacacgccgacgcgcgacatcacattggttaaa
gccacatccccgcgcgccgaggcgatggcgattgcgctgcgtctgcgcaaggccgccgag
gatggccagatggctgccctgatcacgcctgatcggatgctgacacgtcaggtcagctcg
gcgctcggtcgctggggcatcgtgccagacgactccgcaggcactcctctgcaggtgaca
ccgccggggcgcctgctgcgtcaggtcgcccgcctgttcatcgcgccgccgaacgcggtc
gacctgctggccctgctcaagcacccgctgacccactctggcgccaagcgcggtccgcat
ctcgatctgacccggaagcttgagatctacctgcgccgtcacgcccgcccgatgcccgac
accgacgatctgctggccttcgcggcccgtcaaagcggggagttcgcgccgctttgggcc
gagtggctgtgcacccatgtctttgacgccgccgcgcccgagccgatccctctggcgagc
cgcgtcatcaaccacatcgcgctcgccgagatagtttcgcgtggctgtatcgaggacgcc
accggcacgatctgggacaaggatgcgggcatcgaggcgcagcgcatcatggcgacactg
gccgaggacgccgcctatggcagtgactttgccgcgcgcgattacggcgatctggttggc
gcgatcatcgccaatggtgaggttcgcaaccccgaggagccgcaccctcatatcctgatc
tggggcacgctggaggcgcgcgttcagggcgccgatctggtgatcctcggcggtctgaac
gagggcagctggcccgaggcgccgacgcccgacccctggctgaaccgccagatgcggaag
gacgccgccctgttgctgcccgaacgccgcatcggtctttcggcgcatgactttcagcag
gcgatcgccgcgcgggaggtctggctcagccgttccatccgctcgcaggacgcagaaacc
gtgccctcgcgctggctgaaccgtctgaccaacctgctgagcggcctgcccgatgccggc
ccagaagcgctgcgcaggatggaggcgaagggcaatgactggctggccatggcccgcctc
atcgagacacccttcaccgcgcccccggccacgcgccccgcgccctgtccgcccgtcgac
gcccgcccgagggagctttgggccaccgacatccgcaagctgatccgcgacccctacgcg
atttatgccaagcgcatcctgcgcctgtcgccgatgaacccactgatgcgcgaacccgat
gcgctgatgcgtggcatcgtcagtcacgaggtaatcgaggccttcgtgaaaggcgtctgc
gaggatggcctgcccaacacccccgaagcgctgctgcagatcgccagcgaggtactggag
cgcgaggtgccctggggcgaggcgcgggttctctggcacgcccgtctgggccgcattgcg
ggctggttcaccgcgcatgaggccgcacgccagatggaggcagcgcagatccagtatgaa
caggtcggcaaggcgatgatcgcgggtctcggctttaccctcgccgccaaggcggaccgg
atcgatcttgaccatgccggccgggtgcatctgttcgattacaagaccggcatgccgccc
tcaaaggatcagcaggcgctgtttgacaagcagctgctgctggaatccgcgattgccgag
cgtgaaggctttggcaccatgggcccgcgcaccgtcgcacgagcggtctacatcggcctc
ggctccaacccggtggaggcaccggcaccgctggacgaaaactcgcccggacaggtgtgg
gaggagttcaccgagctggcccgcgcctggctggagccgacccgcggctataccgcccgg
cgcgccatgttcgacatgaacgacaccagcgactacgacctgctgtcgcgccatggcgaa
tgggacgtgacgcaggaccccgacaagaggaccgtcgaatga
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