Pseudooceanicola spongiae: F3W81_16715
Help
Entry
F3W81_16715 CDS
T06866
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshq03000
]
F3W81_16715
Transcription factors [BR:
pshq03000
]
Prokaryotic type
Helix-turn-helix
LacI family
F3W81_16715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
Sigma54_DBD
Sigma70_r4
HTH_23
HTH_3
HTH_10
TrmB
HTH_AraC
HTH_Tnp_Tc3_2
Motif
Other DBs
NCBI-ProteinID:
QOL82327
UniProt:
A0A7L9WRI7
LinkDB
All DBs
Position
complement(3565011..3566036)
Genome browser
AA seq
341 aa
AA seq
DB search
MSKPPIRPLTLRDVSEASGVSEMTVSRVLRNRGDVSEATRQKVLLAAKRMGYVPNKIAGA
LASQRVNLVAVIIPSMSNMVFPEVMTGISRVLETSPLQPVVGITDYQPEKEEKVLYEMLS
WRPSGVIIAGLEHSDASRAMLKASGIPVVEIMDTDGTPIDAAVGISHRRAGREMGKSILR
AGYRKIGFLGTRLGADHRARKRFEGFTEALAKGGVEIADTEFYTRGSALGKGREMTQQIL
ARSPELDCLYYSNDIVGAGGLLWMMEQGYDIPGSIGLAGFNDVELLQGLPRKLATMDSCR
SEIGRQAAEIILERVEAPDTPPRGKVELTPRINFGDTLRMG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaaaccgccaatccgccccctgaccctgcgcgacgtatcagaagcatcgggcgtt
tcggagatgacggtcagccgtgtgttgcgcaaccgcggagatgtctccgaagcgacgcgt
caaaaagtcctcctagccgccaaacgcatgggttacgtacccaacaagatcgcaggggcg
ctggccagccagcgtgtgaatctggtcgcagtcatcatcccatccatgtcgaatatggtc
tttccagaggtaatgaccggcatttcgcgcgttctggaaacctctccgctgcaacccgtg
gttggaattaccgactaccaaccggaaaaagaagagaaggtcctctatgagatgctgtca
tggcggccctctggcgtgatcattgccgggcttgagcattcagatgcctcacgcgcaatg
ctcaaagcctctggtatcccagtggttgagatcatggacacggatggcactccaatcgac
gctgcggtcggaatttcacacaggcgcgcagggcgcgaaatgggtaaatccattttgcgc
gcgggatatcgcaagattggcttcctcggcacgagactgggtgctgaccatcgggcccga
aaacgctttgaaggttttaccgaagccttggcaaagggcggcgtcgagatagcggatacc
gaattctacacacgtggatccgctttgggcaaaggacgcgagatgacgcagcagatcctc
gcccgcagcccagaactcgattgtctttattattccaatgacatcgtcggcgctggtggg
ctgctttggatgatggagcaaggttatgatatccccggaagcatcgggctggccggcttc
aacgatgtcgaattattgcaaggtttgccgcgtaaattggcgaccatggattcttgccga
tctgagatcggacgtcaggccgctgaaatcattctcgaacgtgtcgaagcccccgacacc
ccaccgcgcggaaaggttgagttgaccccccggatcaattttggcgatactctgcggatg
ggctga
DBGET
integrated database retrieval system
