Pseudooceanicola spongiae: F3W81_17185
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Entry
F3W81_17185 CDS
T06866
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
pshq
Pseudooceanicola spongiae
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshq03000
]
F3W81_17185
03036 Chromosome and associated proteins [BR:
pshq03036
]
F3W81_17185
Transcription factors [BR:
pshq03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
F3W81_17185
Chromosome and associated proteins [BR:
pshq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
F3W81_17185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR
MarR_2
HTH_11
HTH_Crp_2
Fe_dep_repress
DUF7343
TrmB
NirdL-like_HTH
HTH_5
HTH_1
HTH_20
HTH_34
HTH_27
DUF6159
AsnC_trans_reg_3
LexA_DNA_bind
HTH_28
DUF3562
Sigma70_r4_2
DIP2311-like_C
IR1-M
Motif
Other DBs
NCBI-ProteinID:
QOL82407
UniProt:
A0A7L9WRS9
LinkDB
All DBs
Position
3661797..3662255
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AA seq
152 aa
AA seq
DB search
MSLDQMDRSILRVLQKQGRMSNADLSEKVGLSQSACHRRVQRLETDGYIRDYVALLNARK
MQLATTVFVEIGLSGQADELLEAFETAVARVPEVLECHLMAGTADYLLKVVAESSEDFAR
IHRQSLARLPGVQRMQSSFALRTVFRTTALPV
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcgatcagatggatcgctcgatcctgcgcgtgctgcaaaagcaggggcgcatg
tccaatgccgatctgtcggaaaaggtggggctgtcgcaatccgcctgtcatcgccgcgtg
cagcggctggaaacagacggctatatccgcgactatgtggcgctgctcaatgcccgcaag
atgcagctggccaccacggtctttgtcgagatcggcctctccggccaggcggatgagctg
cttgaggcgttcgagaccgccgtggcccgtgtccctgaggtgctggagtgtcacttgatg
gcggggacggcggattacctgctgaaggtggtcgccgaaagctcggaggatttcgcgcgc
atccaccgtcaaagtctggcgcggctgcccggcgttcagcgcatgcaaagctccttcgcc
ctgcgcaccgtgttccggacaaccgccctgccggtctga
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