Pseudooceanicola spongiae: F3W81_19910
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Entry
F3W81_19910 CDS
T06866
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
pshq
Pseudooceanicola spongiae
Pathway
pshq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pshq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F3W81_19910 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshq03400
]
F3W81_19910 (uvrC)
DNA repair and recombination proteins [BR:
pshq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F3W81_19910 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
HHH_5
HHH_2
UVR
HHH
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
QOL82895
UniProt:
A0A7L9WR77
LinkDB
All DBs
Position
complement(4216954..4218837)
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AA seq
627 aa
AA seq
DB search
MSDETQVNSPAQRAPYGHEIIQGYLATLDSSPGVYRMLDAESRVLYVGKARNLRARVSNY
SRPTGHSARIARMIRETASMMFLTTRTETEALLLEQNLIKQLKPRYNVLLRDDKSFPNIL
VAKDHAYPQIRKHRGAKTSKGAYYGPFASAGAVNRTLNQLQKVFLLRNCTDSMFEGRSRP
CLLYQIKRCSAPCVGYISEADYASSVSDAEKFLQGRTTGVQEKLAAEMAAASEAMEFERA
AAMRDRIRALTQVQSAQGINPRVTGEADVVALHLEGGQACVQVFFIRAHQNWGNQDFYPR
VGADIDEAEVLEAFLGQFYDQKDPPRQILLSHAIENEDLMTEALSEKAGRKVEILVPQRG
EKAELIEGAARNARESLGRKMAESATQTKLLKGVAEAFGLASMPTRIEVYDNSHIQGTNA
VGGMIVAGPDGFMKNQYRKYNIRGEELTPGDDFGMMKEVLNRRLKRLLKEDPDRDKGLWP
DLLLIDGGAGQVSAVQQILNEMGVPDLPMVGVAKGVDRDHGKEEFHRPGTRPFALRMNDP
VLYFIQRLRDEAHRWAIGTHRAKRSKQISANPLDDVPGVGSTRKRALLAHFGSAKAVARA
NLSDLKAVDGVSDSLAETIYDYFHAST
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgagacccaagtgaacagccctgcacagcgcgcgccctacgggcacgagatc
attcaggggtatctggcgaccttggacagttcgcccggtgtctaccgcatgctggatgct
gaaagccgggtgctctacgtcggcaaggcgcgcaatctcagggcgcgggtgtcgaactat
tcgcgccccacggggcattccgcgcgcatcgcccggatgatccgcgaaaccgccagcatg
atgttcctgaccacccggaccgagaccgaggcgctgctgctcgagcagaacctgatcaag
cagctgaagccgcgctacaacgtgctgctgcgcgacgacaagagctttcccaacatcctg
gtcgccaaggatcacgcctatccgcagatccgcaaacaccgcggcgccaagacctcgaag
ggcgcctactacggccccttcgccagtgctggggcggtaaaccggacgctgaaccagctg
cagaaggtcttcctgctgaggaactgcacggattcgatgttcgagggccgctcgcgcccc
tgtctgctgtaccagatcaagcgctgctcggcgccctgcgtcggctacatcagcgaggcg
gactatgcctccagcgtctcggatgccgagaagttcctgcaggggcgcaccaccggcgtg
caggaaaagctcgccgccgaaatggccgccgccagcgaagcgatggaattcgagcgtgcc
gctgccatgcgcgaccgcatccgcgccctcactcaggtgcaaagcgcccaaggcatcaac
ccgcgcgtcaccggcgaggccgacgtcgtggcgctgcatcttgagggcggacaggcctgc
gtgcaggtctttttcatccgcgcgcaccagaactggggcaatcaggacttctacccccgc
gtcggcgccgacatcgacgaggccgaggtgctggaggctttcctcggtcagttctacgac
cagaaggacccgccccgccagatcctgctgagccacgccattgagaacgaagacctgatg
accgaagcactgagcgaaaaggccggtcgcaaggtcgagatcctcgtcccgcaacgcggc
gaaaaggccgagctgatcgagggggccgcgcgcaatgcccgtgaaagtctgggccgcaag
atggccgaaagcgcgacccagacaaagctgctgaaaggcgtggccgaagctttcggactg
gccagcatgccgacccggatcgaggtctacgacaactcgcacatccagggcacaaatgcg
gtcggcggcatgatcgtcgccgggccggacggtttcatgaagaaccagtatcgcaagtac
aacatccggggcgaggagctcactccgggcgatgacttcgggatgatgaaagaggtgttg
aaccgtcgcctgaaacggctgctgaaagaggaccccgaccgcgacaagggcctctggcca
gacttgctgctgatcgacggcggggccggtcaggtttcggcggtgcagcagatcctgaac
gagatgggtgtgcccgacctgcccatggtgggcgtggcaaagggcgtggaccgtgatcat
ggcaaggaagagttccaccgccccggaacgcgtcccttcgcgctgcgcatgaacgacccg
gtgctctatttcattcaacgattgcgcgatgaggcccaccgctgggccatcggcacacac
cgggcgaaacgctccaagcagatctcggccaacccgctggatgacgtgcccggcgtcggc
tcgacccgcaagcgcgccctgctcgcgcacttcggcagcgccaaagcagtggcgcgcgcc
aacctctcggatctgaaggccgttgatggcgtgtcagacagtcttgcagaaacgatctac
gattatttccacgcctccacatga
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