Pseudomonas sp. HS6: JJN09_00615
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Entry
JJN09_00615 CDS
T09971
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JJN09_00615 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshs03400
]
JJN09_00615 (ung)
Enzymes [BR:
pshs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JJN09_00615 (ung)
DNA repair and recombination proteins [BR:
pshs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JJN09_00615 (ung)
Prokaryotic type
JJN09_00615 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UQS15388
LinkDB
All DBs
Position
complement(123386..124081)
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AA seq
231 aa
AA seq
DB search
MTADDRIKLEPSWKEALRAEFDQPYMAELRTFLQQERAAGKEIYPPGPMIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTMTVERANANAHKDKGWQFFTDRIIEVVSQQQPHLVFMLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGEAPIEWRLPSVV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgacgaccgtatcaaactcgaaccgagctggaaggaggcactgcgtgccgaa
ttcgaccagccttacatggcagagttgcgcacttttctgcagcaggagcgggcggccggc
aaggaaatctatccgccgggcccaatgattttcaacgcgttgaattcgacgccgctggac
aaagtaaaagtggtcatcctcggccaggacccgtaccacggcccgggccaggcccacggc
ttgtgcttctcggtgcaaccgggcgtgccggcgccgccgtcgctggtcaacatctataaa
gagttgaaacgcgacctgaacatcgacattcccaaccacggctacttgcagagctgggcc
gatcagggcgtgttgatgctcaacaccaccatgaccgtcgagcgcgccaacgccaatgcg
cacaaggacaagggctggcagttctttacggaccggatcatcgaagtggtcagccagcag
caaccgcatctggtgttcatgctctggggcgcgcatgcgcagagtaaacagaagctgatc
gacgccaccaagcatctggtgttgacgtcggtgcacccgtcgccgctgtcggcctatcgt
ggcttcctcggctgcgggcacttcagccgcaccaacaaattcctcgaacagaatggcgag
gcgccgatcgagtggcgcctgccgtcggtggtctga
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