Pseudomonas sp. HS6: JJN09_01075
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Entry
JJN09_01075 CDS
T09971
Name
(GenBank) high-affinity branched-chain amino acid ABC transporter permease LivM
KO
K01998
branched-chain amino acid transport system permease protein
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02010
ABC transporters
pshs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JJN09_01075
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJN09_01075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_01075
Transporters [BR:
pshs02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
JJN09_01075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
DUF3382
Motif
Other DBs
NCBI-ProteinID:
UQS15479
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All DBs
Position
221828..223084
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AA seq
418 aa
AA seq
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MTRNLKQALFSALLVWAVAYPVLGLKLTIVGINLEVHGTSTSTLITIAVCSVLMFLRVLF
DRQIGAAWKSSPNLPKMPAKASSFLTLPTTQRWIIIALIIGALVWPFFGSRGAVDIATLV
LIYVMLGLGLNIVVGLAGLLDLGYVGFYAVGAYSYALLSHYYGLSFWICLPIAGLMAATF
GFLLGFPVLRLRGDYLAIVTLGFGEIIRLFLRNLTDITGGPNGISNIPKPSLFGLTFDKT
AAEGMQTFHEYFGLTYNPVNKVIFLYLIAVLLSLFALFVINRLLRMPLGRAWEALREDEI
ACRALGLNPTIIKLSAFTLGACFAGFAGSFFAARQGLVTPESFTFIESATILAIVVLGGM
GSQLGVVLAAVVMILLPEMMREFSEYRMLMFGALMVLMMIWRPQGLLPMQRPHMELRK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgactaggaatcttaaacaggcgctgttcagcgccctgctggtgtgggctgtggcctac
ccggtactcggtctgaagctgaccatcgtcggcatcaacctcgaagtgcatggcaccagt
acctcgaccttgatcaccattgccgtctgctcggtactgatgttcctgcgcgtgttgttc
gaccggcagatcggcgcggcttggaaatcctcgccgaacctgcccaagatgccggccaag
gccagcagcttcctgaccctgccgaccacccagcgctggatcatcattgcgttgattatc
ggtgcgctggtctggccgttcttcggctctcgcggcgcggtggatatcgccacgctggtg
ctgatctacgtgatgctgggcctgggcctgaacatcgtggtcggcctggcaggcctgctc
gacctgggttacgtcggcttctatgccgtcggcgcctacagttatgcgctgctgtcgcat
tactacggcctgagcttctggatctgcctgccgatcgccggactgatggcggccaccttc
ggcttcctgctcggtttcccggtactgcgtctgcgcggtgactatctggcgatcgtgacg
ctgggcttcggtgaaatcatccgtctgttcctgcgtaacctcaccgacatcaccggcggc
ccgaacggcattagtaacattcccaagccatcgcttttcggattgaccttcgacaagacg
gctgcagaggggatgcagacctttcacgagtacttcgggctgacctacaacccggtgaac
aaggtgatcttcctttacctgatcgcggtgttgctgtcgctgttcgcgctgttcgtcatc
aaccgcttgctgcgcatgcccctgggccgtgcctgggaagcgttgcgcgaagacgagatc
gcttgccgcgcgctgggtctgaatccgacgatcatcaagctctcggcgtttaccctgggt
gcctgcttcgccggtttcgccggcagtttcttcgccgcccgtcagggtctggtgacgccg
gagtccttcaccttcatcgagtcggcgaccattctcgccatcgtggtgctgggcggcatg
ggctcgcagctgggcgtggtactggccgcggtcgtgatgatcctgctgccggaaatgatg
cgtgagttcagtgagtaccgcatgctgatgttcggcgccctgatggtgctgatgatgatc
tggcgacctcaaggtctgctgcccatgcaacgtcctcacatggagctgcgcaaatga
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