Pseudomonas sp. HS6: JJN09_01920
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Entry
JJN09_01920 CDS
T09971
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00300
Lysine biosynthesis
pshs01100
Metabolic pathways
pshs01120
Microbial metabolism in diverse environments
pshs01230
Biosynthesis of amino acids
Module
pshs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JJN09_01920 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pshs01002
]
JJN09_01920 (dapE)
Enzymes [BR:
pshs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
JJN09_01920 (dapE)
Peptidases and inhibitors [BR:
pshs01002
]
Metallo peptidases
Family M20
JJN09_01920 (dapE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UQS15640
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Position
385515..386666
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AA seq
383 aa
AA seq
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MTAHADLSPTLQLAIDLIRRPSVTPVDADCQKQMMQRLGDAGFTLEPMRIEDVDNFWAIH
GKHDGPVLCFAGHTDVVPTGPVTAWQIDPFNAVIDEHGMLCGRGAADMKGSLASMTVAAE
RFVADYPDHKGKVAFLITSDEEGPAHHGTKAVVERLAARNERLDWCIVGEPSSTTLVGDV
VKNGRRGSLGAKLTVRGVQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDFFPPTSFQ
ISNVNSGTGATNVIAGDLVALFNFRFSTESTVEGLQKRVADILDKHGLDWHIDWALSGLP
FLTEPGALLDAVSSSIKQITGRETKASTSGGTSDGRFIATMGTQVVELGPVNATIHQVNE
RVLAADLDVLTEIYYQTLIKLLA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccacgccgacctttcgccgaccctccaactcgccatcgacctgatccgccgt
ccgtccgtgacgccggtcgacgccgattgccagaagcagatgatgcagcgcctgggcgat
gccggtttcaccctggagccgatgcgcatcgaagatgtggataacttctgggcgatccac
ggcaaacacgacggcccagtgctgtgcttcgccggtcataccgacgtggtgccgaccggt
ccggtgacggcttggcagatcgacccgttcaacgcggtgatcgacgagcacggcatgctc
tgcggccgtggcgcggcggacatgaaaggcagcctggcctcgatgaccgtggcggccgag
cgcttcgtcgccgactacccggatcacaagggcaaggtcgcgttcctgatcaccagcgac
gaagaaggcccggcgcatcacggcaccaaggctgtggtcgagcgtctggcggcacgtaac
gagcgtctggactggtgcatcgtcggcgagccatcgagcaccacgctggtgggcgacgtg
gtgaagaacggtcgtcgcggctccctcggcgccaaactgaccgtacgcggtgtgcagggc
cacgtggcctatccgcacctggcgaagaacccgatccacctcgcggcgccggctctggcc
gagctggccgccgagcattgggatcacggtaacgatttcttcccaccgaccagtttccag
atttccaacgtcaactccggcaccggcgcgaccaacgtgattgcgggcgatctggtggcg
ttgttcaacttccgtttctccaccgaatcgacggttgaaggcctgcaaaagcgcgtcgcc
gacatcctcgacaagcacggtctggactggcacatcgactgggcgctgtccggtctgccg
ttcctcaccgagccgggcgcgttgctcgacgcggtgtcgtcgagcatcaagcagatcacc
ggtcgcgagaccaaggcgtccaccagcggtggcacctccgatggccgcttcatcgcgacc
atgggcacgcaagtggttgaactgggcccggtcaacgcgaccatccaccaggtcaacgag
cgcgtgctggcggccgatctcgacgtgctgaccgagatctactaccagaccctgatcaag
ttgctcgcctga
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