Pseudomonas sp. HS6: JJN09_01955
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Entry
JJN09_01955 CDS
T09971
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
pshs
Pseudomonas sp. HS6
Module
pshs_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_01955
01504 Antimicrobial resistance genes [BR:
pshs01504
]
JJN09_01955
Transporters [BR:
pshs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JJN09_01955
Antimicrobial resistance genes [BR:
pshs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JJN09_01955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UQS15647
LinkDB
All DBs
Position
complement(392891..395959)
Genome browser
AA seq
1022 aa
AA seq
DB search
MRFNLSEWALRNRQIVLFLMLLLAIVGALSYTKLGQSEDPPFTFKAMVIQTRWPGATAQE
VSRQVTERIEKKLMETGEYERIVSFSRPGESQVTFIARDSMHSVEIPDLWYQVRKKVSDI
RQTLPPGIQGPFFNDEFGTTFGNIYALTGDGFDYAVLKDYADRIQIQLQRVKDVGKVDLL
GLQDEKIWVELSNVKLATLGLPLAAVQQALEEQNAVSTAGFFETGSERLQLRVSGNFQTV
DEIRNFPIRVGDRTFRISDVADVRRGFNDPPAPRMRFMGEDAIGLAVAMKDGGDILVLGE
ALEIEFARIQKNLPAGMQLRKVSDQPAAVKSGVGEFVQVLVEALAIVLLVSFFSLGVRTG
MVVALTIPLVLAMTFACMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGFD
RVKAASYAWTSTAFPMLTGTLITAAGFLPIATAQSGTGEYTRSIFQVVTIALLASWVAAV
VFVPYLGEKLLPDLAKIHAAKHGTGDGQPDPYATPFYQRVRRLVEWCVRRRKTVIVLTVG
LFVASVMLFKYVPQQFFPASNRLELMVDLKLAEGASLANTTAEVKRLEAMLKDHAGIDNY
VAYVGTGSPRFYLPLDQQLPAASFAQFVVLAKTIDERETLRTWLIDTLNEQFPALRSRVT
RLENGPPVGYPVQFRVTGEHIEEVRALARKVAAKVRENPHVVNVHLDWEESSKVVYLNID
QDRARALGVSTANLAKFLQSSLTGSSVSQYREDNELIEILLRGTVHERTELSLLPSLAVP
TDNGRSVALSQIATLEYGFEEGIIWHRNRLPTVTVRADIYGKEQPASLVNQIMPTLDPIR
AELPDGYLLDVGGTVEDSERGQTSVNAGVPMFIVVVLTLLMVQLRSFSRTAMVFLTAPLG
LIGVTLFLLVFRQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIAAGLKPWQAIIEATV
RRFRPIVLTALAAVLAMIPLSRSVFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRVRK
EA
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcaacctttccgaatgggcgctgcgtaatcgccagatcgtactgttcctgatg
cttctgctggccatcgtcggcgccttgtcttacaccaaactcggacagagtgaagacccg
ccgttcactttcaaggccatggtcatccagacccgctggccaggcgccacagcgcaggaa
gtctcgcgtcaggtcaccgagcgtatcgaaaagaaactgatggaaaccggcgagtacgaa
cgcattgtttcgttctcccgccccggtgagtctcaggtcacgttcattgcccgcgactcg
atgcattcggtggagatcccggacctctggtatcaggtgcgcaagaaggtcagcgatatc
cgccagaccctgccgccggggattcaggggccattcttcaacgatgaattcggcaccacg
ttcggcaatatctatgcgctgaccggcgacggtttcgactacgccgtgctcaaggattac
gccgaccgcatccagatccagttgcaacgggtcaaggacgtgggcaaggtcgatctgctc
gggctgcaggacgagaagatctgggtcgagctgtccaacgtcaagctcgccaccctcggc
ctgccattggcggcggttcagcaggcgctggaagaacaaaacgcggtgtccaccgccggg
ttcttcgaaaccggcagcgagcgattgcagctacgggtctcggggaattttcagacagtc
gacgagatcaggaacttcccgatccgggtcggtgatcgtacgttccgtatctccgatgtc
gctgatgtgcggcgcggtttcaacgatcctccggcgccgcgcatgcgtttcatgggcgaa
gacgcgatcggacttgcggtggcgatgaaggacggcggcgacattctggtgctgggcgag
gcgctggaaatcgaattcgcccggatccagaaaaacctgccggccggcatgcagttgcgc
aaggtgtccgatcaaccggcggcggtgaaaagtggcgtcggcgagttcgtccaggtgctg
gttgaagcgctggccatcgtgttgctggtgagcttcttctccctcggtgtgcgcaccggc
atggtggtagcgctgaccattccgctggtgctggcgatgaccttcgcctgcatgtattac
ctcggtatcggcttgcacaagatttctctcggtgcgctggtactggcgctgggcttgctg
gtggacgacgcgatcattgccgtggaaatgatggcgatcaaaatggagcagggcttcgac
cgggtcaaagccgccagttatgcctggaccagcaccgcattcccgatgctcaccggtacg
ttgatcaccgccgcaggcttcttgccgattgccaccgcccagtccggcaccggtgaatac
acccgctcgattttccaggttgtcaccattgcgttgctcgcttcgtgggtggcggcggtg
gtgtttgtgccgtatctcggggaaaaactcctgccggatctggcgaaaattcacgcagcc
aaacacggcactggcgatggtcaaccggacccctatgccacgccgttttaccagcgggtt
cgacgtctggtggagtggtgcgtgcgtcgacgcaagacggtaatcgtgctgacggtgggg
ctgtttgtcgcgtcggtgatgctgttcaagtacgtcccgcagcagttcttcccggcctcc
aaccggctggaactgatggttgatctgaaattggccgaaggcgcttcgctggccaacacc
accgccgaggtcaagcgactggaggcgatgctcaaggatcacgccggcatcgacaattac
gtcgcctatgtcggtaccgggtcgccgcgtttctacctgccgctggatcaacaactgccg
gcggccagcttcgcccagttcgttgtgttggcgaaaaccatcgatgagcgtgagacgctg
cgtacgtggctgatcgataccttgaacgaacaattcccggccctgcgctcgcgggtcacg
cgactggaaaacggcccgccggtcggctatccggtgcagttccgcgtcaccggcgaacac
atcgaagaagtccgtgcgctggcacgcaaggtcgcggccaaggttcgcgagaatccgcat
gtggtcaacgtgcatctggactgggaagagtcaagcaaggttgtgtacctgaacatcgat
caggatcgcgcccgggcgctgggtgtgagcacggcgaatctggcgaaattcctccagagt
tcgctgactggttccagcgtcagccagtaccgcgaagacaacgaattgatcgagatcctc
ctgcgcggcacggtacatgagcgcaccgagctgtcgctgctgccgagtctcgcggtgccg
accgacaacggccgcagcgttgcgctgtcgcagattgccacgctggaatatggcttcgag
gaaggcatcatctggcatcgcaatcggctgccgaccgtgaccgtgcgtgcggacatctat
ggcaaggagcagccggcctcgctggttaatcagatcatgccgacgctcgatccgattcgc
gctgaattgccagacggctatctgctggatgttggcggcactgttgaggactccgagcgc
gggcagacgtcggtgaatgccggtgtgccgatgttcattgtcgtggtgctgacgttgctg
atggtgcagctgcgcagtttctcgcgcacggcgatggtgtttctgacggcgccgctgggg
ttgatcggggtgacgctgtttctgttggtgttccgccagccgttcgggtttgtggcgatg
ctcgggacgattgcgttgtcggggatgatcatgcgcaactcggtgattctggtggatcag
atcgagcaggatattgcggcggggctcaagccctggcaggcgattatagaggcgacggtg
cggcggttccggccgattgtgttgacggctttggcggcggtgctggcgatgattccgttg
tcgcgcagtgtgtttttcgggccgatggcggtggcgatcatgggggggttgattgttgcg
actgctctgacgcttttgtttttgccggcgttgtatgcggcttggttcagggttcgcaag
gaggcttga
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