Pseudomonas sp. HS6: JJN09_02115
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Entry
JJN09_02115 CDS
T09971
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJN09_02115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_02115
Transporters [BR:
pshs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
JJN09_02115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
AAA_22
AAA_16
AAA
AAA_29
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
UQS15677
LinkDB
All DBs
Position
429543..430580
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AA seq
345 aa
AA seq
DB search
MTLAVQFTNVSRQFGEVKAVDRVSIDIQDGEFFSMLGPSGSGKTTCLRLIAGFEQPSAGS
IRIHGAEAAGLPPYQRDVNTVFQDYALFPHMNVLDNVAYGLKVKGVSKTERHKRAEEALD
MVALGGYGARKPVQLSGGQRQRVALARALVNRPRVLLLDEPLGALDLKLREQMQSELKKL
QRQLGITFIFVTHDQTEALSMSDRVAVFNKGRIEQVDTPRNLYMKPTTTFVAEFVGTSNV
IRGDLARQLSGHPQPFSIRPEHVRFAEGPLASHEIEVSGLLHDIQYQGSATRYELTLENG
QTLSISHANNQWIDSSAQHQTGQRLSARWAREAMIPLHDTVAGGV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgacgcttgcagtccagttcaccaacgtttcccggcagttcggcgaggtgaaggccgtt
gaccgggtttccatcgacatccaggacggcgagttcttttccatgctcggcccctccggt
tcgggcaagaccacgtgcctgcgcctgattgccgggttcgaacaaccgagcgctggctcg
atccgcattcacggcgccgaggccgcggggctgccgccgtatcagcgcgacgtcaacact
gtgtttcaggattacgcgctgttcccgcacatgaacgtgctggacaacgtggcctacggt
ttgaaggtcaaaggcgtaagcaagactgagcgccacaaacgcgccgaagaagcgttggac
atggtcgccctcggcggctacggcgcgcgcaaaccggtgcagttgtcaggcggtcagcgt
cagcgtgtcgccctcgctcgcgccttggtcaatcgtccgcgagtgctgttgctcgatgaa
ccgttgggcgccctcgatctgaagttgcgcgaacaaatgcagagcgaactgaagaaactg
caacgccagctcggcatcaccttcatcttcgtcacccacgatcagactgaagcgctgtcg
atgtccgaccgcgtggccgtgttcaacaagggtcgcatcgaacaggtcgacaccccgcgc
aatctgtacatgaaacccaccacgacgttcgtcgccgaattcgtcggtacttcgaatgtg
attcgcggcgatctggcgcgccagctcagcggtcatccgcagccattctcgatccgtccg
gaacacgtgcgtttcgccgaaggcccgctggccagccatgaaatcgaagtcagcggcctg
ctccacgatattcagtatcagggcagcgccacgcgctatgaactgaccctggaaaacggc
cagaccctgagcatcagccacgccaacaatcaatggatcgacagcagcgcgcagcaccag
accggtcagcgcctgagtgcgcgttgggcgcgggaagcgatgattccgttgcacgacacc
gttgcgggcggggtgtga
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