Pseudomonas sp. HS6: JJN09_02360
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Entry
JJN09_02360 CDS
T09971
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JJN09_02360 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pshs03019
]
JJN09_02360 (rnc)
03009 Ribosome biogenesis [BR:
pshs03009
]
JJN09_02360 (rnc)
03036 Chromosome and associated proteins [BR:
pshs03036
]
JJN09_02360 (rnc)
Enzymes [BR:
pshs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
JJN09_02360 (rnc)
Messenger RNA biogenesis [BR:
pshs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JJN09_02360 (rnc)
Ribosome biogenesis [BR:
pshs03009
]
Eukaryotic type
90S particles
RNase
JJN09_02360 (rnc)
Prokaryotic type
rRNA processing factors
JJN09_02360 (rnc)
Chromosome and associated proteins [BR:
pshs03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
JJN09_02360 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
UQS15726
LinkDB
All DBs
Position
complement(483766..484455)
Genome browser
AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFDRFP
LAREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIG
AIYLDAGMEVARERVLAWLAGEFEGLTLVDTNKDPKTRLQEFLQSRGCDLPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttctctaagccgtctcgagcgtcagctcggttacaccttcaaggaccaggaa
ctgatggtcctggcccttacgcaccgcagctttgccggacgcaacaacgagcgtctggag
ttcctcggcgatgcgatcctcaacttcgtcgctggcgaggcactgttcgaccgcttcccg
ctggcccgcgaaggccagttgtcgcgtttgcgtgcacgtctggtgaaaggtgagaccctg
gccgtgctggcccgtggttttgacttgggcgagtacctgcgcctgggctccggtgagctg
aaaagcggcggtttccgtcgcgaatcgattctggccgatgccctggaagcgctgattggc
gcaatctacctcgacgccggtatggaagtcgcccgcgagcgtgttctggcctggctggcc
ggcgagttcgaaggtctgacgctggtcgacaccaacaaggatccgaagacccgcctgcag
gaattcctgcaatcgcgcggttgcgacctgccacgctatgaagtggtggatatccagggt
gaaccgcactgtcgtacgttcttcgtcgagtgcgaagttgtcctattgaatgaaaaaagc
cggggtcagggtgtgagccgtcgcattgccgaacaggtagcggccgccgcagcactgatt
gccctgggtgtggagaatggcaatgactga
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