Pseudomonas sp. HS6: JJN09_03060
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Entry
JJN09_03060 CDS
T09971
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pshs03019
]
JJN09_03060 (rapZ)
Messenger RNA biogenesis [BR:
pshs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JJN09_03060 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_33
AAA_29
AAA_28
AAA_22
CoaE
AAA_16
SKI
Motif
Other DBs
NCBI-ProteinID:
UQS15863
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All DBs
Position
630676..631533
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AA seq
285 aa
AA seq
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MRLIIVSGRSGSGKSTALDVLEDNGYYCIDNLPAGLLPELAERALIHTELSQPLVAVSID
ARNLPSHLSRFPELLEEVRSRHIQCDVLYLDADEETLLKRFSETRRRHPLSSANRSLAEA
INDETALLGPIADLADLKVNTTNLNLYQLRDTIKLRLLNQPEPGTAFLVESFGFKRGMPV
DADLVFDVRCLPNPYWKPELRAQSGLDEPVAEYLAAQPEVEEMFQDIYAYLFKWLPRFAA
SNRAYVTIAIGCTGGHHRSVYLTERLGQALQKTLKNVQVRHRDLS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgatcattgtcagtggccgctccggctcgggtaaaagtaccgccctggatgtc
ctcgaggacaacggctactactgcatcgacaatttgcctgccggcctgctgccggaactg
gcggaacgcgcactgattcatacggaactgtctcagccactggtcgcggtatcgatcgat
gcgcgcaatctgccaagccatctatcgcgctttccggagttgcttgaggaggtccgcagc
cggcacatccagtgcgacgtcctgtatctggatgccgatgaagaaaccctgctcaagcgc
ttctcggaaacccgtcgtcgccaccctcttagcagcgcaaatcgttcgctggccgaagcc
atcaatgatgaaactgccctgctggggccgatcgccgatctggccgacctgaaggtcaac
accaccaatctgaacctgtaccagttgcgcgacaccatcaagctgcggctgctgaaccag
ccggagccaggcactgcgtttctggtggagtcgttcggtttcaaacgcggcatgccggtg
gatgcggatctggtgttcgatgtacgctgcctgcccaacccgtactggaaaccggaacta
cgagcacaatccgggctcgatgagccggtagccgagtacctggcggcacaaccggaagtc
gaagagatgttccaggacatctatgcgtatctgttcaaatggctgccgcgcttcgctgca
agcaatcgcgcctacgtcaccattgccattggctgcaccggcgggcatcaccgttccgtc
tacctgactgaacgcctgggtcaggccctgcagaaaaccctgaagaacgtccaggttcgc
caccgcgacctcagctaa
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