Pseudomonas sp. HS6: JJN09_03440
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Entry
JJN09_03440 CDS
T09971
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pshs03016
]
JJN09_03440 (truB)
Enzymes [BR:
pshs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JJN09_03440 (truB)
Transfer RNA biogenesis [BR:
pshs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JJN09_03440 (truB)
Prokaryotic type
JJN09_03440 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UQS15933
LinkDB
All DBs
Position
complement(720092..721009)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLQERPVTVGQADIEAVLPTFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
ctggggttcacctcaaacgccgcgttgcagaaggttcgctggctgctcaatgccgagaag
gccggacacaccggcagtctcgacccgctggccaccggcgtgctgccgctgtgctttggc
gaggcgaccaagttctcgcaatacctgctcgattccgacaagggttacgaaaccctggcg
caactgggcaagaccaccaccacggcagacgctgaaggtgaggttttgcaggagcgtccg
gtgaccgttggtcaggccgacattgaagcggttctgccgacatttcgcggtcaaatcagt
cagataccgccgatgtactcggctctcaagcgtgatgggcagccgctgtacaagctggcc
cgtgcaggcgaagtagtggagcgcgaaccgcgttctgttactattgcgcgcttggaatta
ctggccttcgaaggcgatactgcgcgtcttgcggtggattgcagcaagggcacctatatt
cgtaccctggtggaggatatcggtgagcaactcggttgtggtgcgtacgtcgctgaattg
cgccgtacccaggccgggcctttcaccctggcgcagaccgtgaccctcgaagagcttgaa
gcggtacatgccgaaggcggcaacgaagcagtcgaccgcttcctgatgccatcggacagt
ggcctgctggattggccactgcttcacttctcggaacacagtgcgttctactggctcaac
ggccaaccggtacgtgctccggatgctccgaagttcggcatggtgcgagtacaggatcat
aacggtcgcttcatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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