Pseudomonas sp. HS6: JJN09_03795
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Entry
JJN09_03795 CDS
T09971
Name
(GenBank) MexW/MexI family multidrug efflux RND transporter permease subunit
KO
K18307
multidrug efflux pump
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JJN09_03795
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_03795
Transporters [BR:
pshs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JJN09_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UQS15998
LinkDB
All DBs
Position
complement(794405..797482)
Genome browser
AA seq
1025 aa
AA seq
DB search
MNFTDLFLRRPVLAVVVSTLILLFGVRALMNLPIRQYPMLETSTITVTTQYPGASSELMQ
GFVTQPISQAVASVEGIDYLSSASTQGRSQVTIRMALNSDSIAALTEVMAKVNQIKYRLP
KDAYDPVVERTSGGFTSVAYVAFASSNLTIPEMSDYISRVVEPMFAGIEGVAKINIMGEQ
KLSMRLWLDPQRLAGYGMTGQDVSAAIEGNNFQAAPGQVKGLYVVSNLRVNTDLNSVEDF
RDMVLRNDNGHIIRVRDVGTVELNAASTDTSGAMSDVPALFLGLDAAPTGNPLVIVKRVR
ELLPQIQETLPPGVTVQIPFEVAHFIQSSIDEVSYTLLEALVIVVLVIYLCLGTFRTVLI
PLVTIPLSMLGAAMLMQMFGFSLNLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKTPF
DAALIGAREVAGPVVAMTFTLAAVYAPIGLMGGLTGTLFKEFALTLAGAVVISGIVALTL
SPIMSTRLLDAKTSEGFMAVKADRFFQYLSRRYGALLGGSLARRWISLSVALVIFFSLPF
LYRSAQTELAPLEDQNILLTAIKAPQHANLNYLEAYAHELYKTFNEIPEGYSNWVANGSD
GLSNSVGGINLVDWEKRGRDANTIQPDLQARVNQIEGTSIFVFQMPPLPGSTGGLPVQMV
IRSDQDYLALYNVMDQLKKAAQASGLFAVVDSDLDFNNPVVEIQVDRAKANALGIRMQDI
GETLNSLIGEKYVNRFSFHGRSYDVIPQSVSADRLTPETLKLYYVKDQKGNPVPLSTLAT
LSVKVEPNRLTQFNQQNSATFQAIPAPGVTLGDAVGFLQKQSENFPAGFSFDWQSDARQY
VQEGNSLAFTFGLALVIIYLVLSVQYESFRDPFIILISVPLSICGALVPLALGMTSMNIY
TQIGLITLIGLISKHGILMVAFANELQRQQGMDRVQAIQHAAQVRLRPILMTTAAMVVGL
APLLFASGAGANSRFGLGLVIVVGMLIGTLFTLFILPSVYTLLSSIKQPSHAPEAEPAGV
PQPIL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcaccgacctctttcttcgccgcccggtgctggccgtggtggtcagcacgctg
atcctgctgttcggggtacgtgcgctgatgaacctgccgatccgtcagtacccgatgctg
gaaacgtcgaccatcacggtcaccacccagtatcccggcgcctcttcggaactgatgcag
ggctttgttacgcaaccgatcagccaggccgtggcctcggtcgaaggcatcgactatctg
tcgtcggcctcgacccagggtcgcagccaggtgacgatccgcatggcactcaacagtgac
tccatcgcggcgctgaccgaggtcatggccaaggtcaaccagatcaaatatcgcttgccg
aaagatgcttacgacccggtggttgaacgtacttccggcggtttcaccagcgtggcctac
gtcgcgttcgccagttccaacctgaccattccggagatgtcggattacatctcccgtgtc
gtcgagccgatgttcgccggcatcgaaggcgtggccaagatcaacatcatgggcgagcag
aaactgtccatgcgcctgtggctcgatccgcagcgtctcgccggttacggcatgaccggg
caggacgtttcggccgccatcgaaggcaacaacttccaggcagcgccgggtcaggtcaaa
ggcctgtacgtggtcagcaacctgcgggtcaacactgacctgaacagcgtcgaagacttc
cgcgacatggtgctgcgcaacgacaacggccacatcatccgtgtacgtgacgtcggcacg
gtggaactgaacgcagcctccaccgacaccagcggcgcgatgagtgacgtaccggcgctg
ttcctcggtctggacgccgctccgaccggcaacccgctggtcatcgtcaaacgcgtgcgc
gaattgctgccgcagatccaggaaacgctgccaccaggcgtgaccgtgcagatcccgttc
gaagtggcgcacttcattcagtcgtcgatcgacgaggtgagctacaccctgctcgaagcg
ctggtgatcgtggtgctggtgatctacctgtgcctcggtacgttccgcaccgtgctgatt
ccgctggtgaccattccgctgtcgatgctcggcgcggcgatgctgatgcagatgttcggc
ttcagcctcaacctgctgaccttgctggcgatggtgctggccatcgggttggtggtggac
gacgccatcgtcgtggtggaaaacgttcaccgtcacatcgaagagggcaagacgccgttc
gacgctgcactgatcggtgcgcgtgaagtggccgggccggtggtggcgatgaccttcacc
ctggcggcggtgtacgcgccgatcggtctgatgggcggcctcactggtacgctgttcaag
gagttcgcgctgaccctggcgggcgccgtggtgatttccggcatcgtcgctctgaccctg
tcgccgatcatgagtacccgcctgctggacgcgaaaaccagcgaaggtttcatggcggtc
aaggcggatcgtttcttccagtacctgtcccgtcgttatggcgcgctgctcggcggttcg
ctggcacgtcgctggatcagtctgagcgtggcgctggtgatcttcttcagcctgccgttc
ctctatcgctcggcgcagaccgaactggcgccgctggaagaccagaacatcctgctgacc
gcgatcaaggcgccgcagcacgccaacctgaattacctcgaggcctacgcccacgagttg
tacaagaccttcaacgaaatccccgagggctacagcaactgggtggcgaacggttccgac
ggcctgtccaacagcgtcggcggcatcaacctggtggactgggaaaaacgcggccgcgat
gccaacaccatccagcctgacttgcaggcgcgggtgaaccagatcgaaggcacgagcatt
ttcgtgttccagatgccgccgctgccgggctctaccggtggtctgccggtgcagatggtg
atccgcagcgatcaggattatctggcgctgtacaacgtgatggatcagctcaagaaagcg
gctcaggccagtggtctgttcgcggtggtcgacagcgatctggacttcaacaacccggtg
gtggaaatccaggtcgaccgcgccaaggccaacgccctgggcatccgcatgcaagacatc
ggcgagacgctcaacagcctgatcggcgagaagtacgtcaaccggttctcgttccacggt
cgctcctacgacgtgatcccgcagtcggtgtcggcggatcgcctgaccccggaaaccctg
aagctgtattacgtgaaggatcagaagggcaatccggtgccgctgtcgacgctggccacc
ctcagcgtcaaggtcgagccgaatcgcctgacccagttcaaccagcagaactccgccacg
ttccaggccattccggcgccgggcgtgacattgggtgatgcggtgggcttcctgcagaaa
caatcggaaaacttcccggccggcttcagtttcgactggcagtccgacgcccgccaatac
gtgcaggaaggcaacagcctggcgttcactttcggcctggccctggtgatcatctacctg
gtgttgagcgtgcagtacgagagcttccgcgacccgttcatcattctgatcagcgtgccg
ttgtcgatctgcggggctttggtgccgctggcgctgggcatgacctcgatgaacatctac
acccagatcggcctgatcacactgatcggtctgatcagtaagcacgggatcctgatggtc
gcgttcgccaatgagttgcagcgccagcaaggcatggaccgcgtgcaagcgatccagcac
gccgcgcaagtacgtctgcggccgatcctgatgaccaccgctgccatggtggtcggcctc
gcgcccctgttgttcgccagcggtgccggcgccaacagccgcttcggcctgggcctggtg
attgtggtggggatgctgatcggcaccttgttcaccctgttcattctgccgtcggtgtac
acgctgctcagttcgatcaagcaaccgagccacgcacccgaagccgagccggccggtgtg
ccgcaacccatcctgtga
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integrated database retrieval system
