Pseudomonas sp. HS6: JJN09_03870
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Entry
JJN09_03870 CDS
T09971
Name
(GenBank) diguanylate cyclase
KO
K21021
diguanylate cyclase [EC:
2.7.7.65
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JJN09_03870
Enzymes [BR:
pshs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
JJN09_03870
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
CHASE8
HAMP
SMP_2
DUF7801
Trp_oprn_chp
Motif
Other DBs
NCBI-ProteinID:
UQS16013
LinkDB
All DBs
Position
complement(813870..815138)
Genome browser
AA seq
422 aa
AA seq
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MRRNKSTGRPTLGSVIGRGYLIVALVAVAMASVSLTLLGVLALRVYADHNLHLIARSISY
TVEAAVVFNDKPAATEALALIASTEEVADAQVLDSQGQLIARWQRPENGLFSGLEMQITR
VILEKPISLPILHQDREIGRILLIGHGGSLMRFLLSGLAGIILCTAISAWVAFYLARRQL
RVIIGPLHSLAGVAHAARSERALDRRVPPAKIAELDNLGNDFNALLDELESWQTHLQSEN
ETLAHQATHDSLTGLPNRAFFEGRLIRALRSANKLNERVAVLFLDSDRFKGINDNFGHAA
GDAVLVAVANRVRAQLREEDLVARLGGDEFAVLLTPLHKTEDAERIADKILASMDTPIAL
PGDTSVVTSLSIGIAVYPDHGATPGALLDAADAAMYQAKRLSRGAQFTAGSEHPVDPVQT
RS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcaacaaatccacagggcgaccgaccctgggctcggtcatcggtcgcgggtac
ttgatcgttgcgctggtcgccgtggcgatggccagtgtgtccctgaccctgctcggcgtg
ttggcgctgcgggtctatgccgatcacaatctgcacctgatcgctcgttcaatcagttac
accgtggaagcggcggtggtattcaacgacaagcctgccgcgacggaggcactggcgttg
attgcctcgaccgaagaagtggcggacgctcaggtgctggacagccagggtcagttgatc
gcgcgctggcagcgtccggaaaacggcttgttttccgggctggaaatgcagataactcga
gtgattctggaaaaaccgatcagcctgccgatcctgcatcaggatcgtgagatcggccgg
atcctgttgatcggtcacggcggcagcttgatgcgttttctgttgagcggtctggccggc
atcatactctgcaccgcgatcagcgcctgggtggcgttctatctggcacgtcggcagtta
cgcgtgattatcggcccgctgcacagtctggcgggagtggcccacgccgcacgcagcgag
cgcgcactggatcgtcgcgtaccgccggcgaagatcgccgaactcgacaatctcggtaac
gacttcaatgccctgctcgatgagctggagtcctggcagacccacctgcaaagcgagaac
gaaaccctcgcccaccaggccactcatgacagcctcacaggtttgcccaatcgggccttt
tttgaaggccgcctgatccgtgcgttacgcagcgccaacaaactcaacgagcgtgtggcg
gtgctgtttctcgacagtgaccgtttcaaggggattaacgacaacttcggtcatgccgcc
ggcgatgcggtgctggtggcggtggcgaatcgggtgcgggcgcagttgcgcgaagaggat
ctggtggcgcgcctgggcggcgatgagtttgctgttttgctgacaccgttgcacaagacc
gaagacgccgagcgcattgccgacaagattctcgccagcatggacaccccgattgcactg
ccgggcgacaccagtgtggtgacttcgctcagtatcggcattgcggtttaccccgatcat
ggtgccacgcccggcgctttacttgatgcggccgacgccgccatgtatcaagccaagcgt
ctgtcgcgtggcgcccaattcacggccgggtcggagcacccggtcgatcccgttcaaacc
aggagctga
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