Pseudomonas sp. HS6: JJN09_05175
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Entry
JJN09_05175 CDS
T09971
Symbol
arnT
Name
(GenBank) lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase
KO
K07264
4-amino-4-deoxy-L-arabinose transferase [EC:
2.4.2.43
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00540
Lipopolysaccharide biosynthesis
pshs01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
JJN09_05175 (arnT)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
JJN09_05175 (arnT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pshs01005
]
JJN09_05175 (arnT)
Enzymes [BR:
pshs01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.43 lipid IVA 4-amino-4-deoxy-L-arabinosyltransferase
JJN09_05175 (arnT)
Lipopolysaccharide biosynthesis proteins [BR:
pshs01005
]
Lipid A
JJN09_05175 (arnT)
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Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_2
DUF6057
Motif
Other DBs
NCBI-ProteinID:
UQS16256
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Position
complement(1109652..1111301)
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AA seq
549 aa
AA seq
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MSKRWALPLLIGLILLAYLLPLGTHGLWIPDETRYAQISQDMLLSGNWVSPHFMGLRYFE
KPIAGYWMIALGQELFGQNLFGVRFASALSTGLSVLLCFLIARRLWNEPRKSFVCALLYM
SFTVVAGQAGYANLDPQFTFWVNLSLVALWFAVDSHSTRQRLISWAVLGLACGMGFMTKG
FLAWLLPVLIALPWMLWQKRWRELLIYGPVAIAVAIIVSLPWVLAVHSQEPDYWRFFFWH
EHIRRFAGDDAQHDAPWWFYLPLLVAFSLPWVGMLPPAFKQAWQTRAQPGIAFLLLWLVM
PLAFFSLANGKLPTYILPCLLPLALLLGHALADRLRLEQGRALSVNGLLNLVLGVITLIA
LVYLQLKKPVYDHELHSMVLVFIALIGWIIANLAQAFLPLQCWAAPALGSLLLIGVLPAA
LPKSVVANKTPDQFILHHLDELSGTTHLLSNDLGAASALAWRLKQPKVALYNTVGELKYG
LSYPEGAEQRITTDQVQQWVRDARRTGSVGVVMRVKGDDELHEVDLLPKDGTRYEQGNLV
IIVLPKDPS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgctgggcattgccgctgcttatcggacttatcctgctggcctacttgctg
ccgctcggcacgcatggcttgtggattcccgatgaaacccgttacgcacagatcagccag
gacatgctgctgagcggcaactgggtgtccccgcatttcatgggcctgcgctatttcgag
aaaccgattgccggttactggatgatcgcgctcggccaggaactgttcgggcaaaacctg
tttggtgtgcgtttcgcctcggccctcagcacgggtttgagtgtgctgttgtgcttcctg
atcgcccgccggttgtggaacgagccgcgcaaaagcttcgtctgcgccctcctctacatg
agcttcaccgtcgtcgccggccaggctggttacgccaacctcgatccgcagttcaccttc
tgggtcaacctgagccttgtggcgctatggtttgctgtcgacagccacagcaccaggcaa
cgtctgatcagttgggcggtgttggggctggcctgcggcatggggttcatgaccaagggt
tttctcgcctggctgctgccggtgctgattgccctgccgtggatgctctggcagaagcgc
tggcgtgaactgctgatctatggtccggtggcaattgccgtggcgatcatcgtcagcctg
ccgtgggtcctcgcggtccattcgcaggagccggactactggcggttcttcttctggcac
gaacatattcgccgctttgccggtgacgacgcccagcatgatgcaccgtggtggttctac
ctgccgttgctggtcgcgttcagcctgccatgggtcggcatgctgccgccggccttcaag
caggcctggcagacccgtgcccaaccgggcattgccttcctgctgctgtggctggtgatg
ccgctggcgtttttcagcctggccaacggcaagttgccgacctacatcctgccgtgtctg
ctgccactggcgctgttgctgggtcatgcactggccgatcgtctgcgtctggaacagggt
cgggcattgagcgtcaatggtctgctgaacctggtgctgggcgtcatcacactgatcgca
ctggtttacctgcaattgaaaaaaccggtgtacgaccacgaactgcacagcatggtgctg
gtgttcattgccttgatcggctggatcatcgccaacctggcgcaagcgtttctgccgctg
caatgctgggcggctccggccctcggcagcctgctgctgatcggtgtgctgccggccgcg
ttgccgaagtccgtggtggccaacaagaccccggaccagttcatcctgcatcacctcgac
gaactgtccggcaccactcacctgctgagtaacgatctcggtgctgcctcggcactggcc
tggcgcctgaagcaacccaaggtggcgttgtacaacaccgtgggcgagctgaaatatggc
ctgtcctaccctgaaggcgccgaacagcggatcaccaccgatcaagtccagcagtgggtg
cgtgatgcccgccgcaccggctcggtcggcgtggtcatgcgggtcaagggcgacgacgag
ctgcacgaagtcgacctgctgcccaaggacggtactcgttacgagcaaggcaacctggtg
atcatcgtcctgcccaaggatccgtcatga
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