Pseudomonas sp. HS6: JJN09_05750
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Entry
JJN09_05750 CDS
T09971
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs01501
beta-Lactam resistance
pshs02020
Two-component system
Module
pshs_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JJN09_05750
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JJN09_05750
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_05750
01504 Antimicrobial resistance genes [BR:
pshs01504
]
JJN09_05750
Transporters [BR:
pshs02000
]
Other transporters
Pores ion channels [TC:
1
]
JJN09_05750
Antimicrobial resistance genes [BR:
pshs01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
JJN09_05750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
UQS16367
LinkDB
All DBs
Position
1253435..1254715
Genome browser
AA seq
426 aa
AA seq
DB search
MKAIIMPLVLCALTENALAGGFIEDAKVDVLSRNFYLSNDYRSPSPAGKNYKQEWAQGFI
GTFASGFTDGTLGFGLDAHAFYGLKLDGGRGHSGTGLLPVDSDGRSESDYSSAGGALKLK
ASRITLAFGEMTVETPVFDTSDKRLQPEYATGFLLNSREIDNVNLVAGHFTAFKNQDSSS
GKGDFQGYGASTKAGGISFIGADLFSESPVGGALYASDLSETWHQYYANLHFKQSGVLID
ANVYHTRDSGQALAGEIDNTAFSLSGKYAFGPHAVMLGWQRINGDTPFDFVGGDSIYLAN
SIKYADFNGAHERSWQARYDLDLGALGIPGLTFMTRYVSGSHIDGTHAPKGGAYNPFDAD
SGQYQPLQGDGGKHWERDIDLRYIVQSGAAKDLSVQLSHVSHRANSAQAGDDIDRVYVVI
QYPLGF
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgataatcatgccgttagtgctttgcgcactgacagaaaacgcgcttgccggt
ggttttatcgaagatgccaaggttgatgtgctcagccgcaacttctatctgagcaacgat
taccgctcgccctctcccgccgggaaaaattacaaacaggaatgggctcaagggtttatc
ggcaccttcgcatccggtttcaccgacggaacgctcgggttcggcctcgatgcccatgcc
ttttatggtctgaaactggatggcggtcggggacattccggcaccgggctgttacccgtg
gacagtgacggtcgcagcgagagcgattactcaagcgccggcggcgccttgaaactgaaa
gcttcgcgcatcaccctcgccttcggagaaatgaccgtcgagacaccggttttcgacacc
tcggacaaacgcctgcaaccggaatacgccaccgggtttctacttaacagccgtgaaatc
gacaacgtgaatctggtggccgggcatttcaccgcgttcaagaatcaggacagctcatcc
ggcaaaggcgatttccagggttatggcgccagtacgaaggccggcgggatcagcttcatc
ggcgcagacctgttcagcgaaagcccggtaggcggcgcgctgtatgcctccgacctcagc
gaaacctggcaccagtactacgccaacctgcatttcaaacaatccggcgtattgatcgac
gccaacgtctaccacacccgcgatagcggccaggcgctggccggcgaaatcgataacacc
gcgttcagtctctcgggcaaatacgccttcggcccgcatgcagtgatgctcggctggcaa
cgcataaacggagatacaccgttcgatttcgtcggtggcgactctatctacctcgctaac
tcgatcaagtacgccgacttcaacggcgcccacgagcgctcctggcaagcccgttatgac
ctcgatctcggagcgctcggcattcccgggctcactttcatgacccgctacgtctccggc
agccacatcgacggcacccacgcgcccaagggcggcgcctacaacccgttcgacgcggac
agcggccaataccagccactgcaaggcgacggcggcaagcactgggagcgcgacatcgat
ctgcgctacatcgtgcagtccggggcggccaaggatctttcggtgcagctgtcccacgtc
tcgcaccgggccaacagcgctcaggcgggtgatgacattgaccgggtctacgtggtgatt
cagtacccgttgggcttctga
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