Pseudomonas sp. HS6: JJN09_05780
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Entry
JJN09_05780 CDS
T09971
Symbol
fdxH
Name
(GenBank) formate dehydrogenase subunit beta
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00630
Glyoxylate and dicarboxylate metabolism
pshs00680
Methane metabolism
pshs01100
Metabolic pathways
pshs01120
Microbial metabolism in diverse environments
pshs01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JJN09_05780 (fdxH)
09102 Energy metabolism
00680 Methane metabolism
JJN09_05780 (fdxH)
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Gene cluster
GFIT
Motif
Pfam:
Fer4_11
Form-deh_trans
Fer4_7
Fer4_2
Fer4_9
Fer4_10
Fer4_6
Fer4_21
Fer4
Fer4_4
Fer4_15
Fer4_17
Fer4_3
Fer4_8
Fer4_16
Fer4_22
Fer4_13
Motif
Other DBs
NCBI-ProteinID:
UQS16371
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All DBs
Position
complement(1259778..1260713)
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AA seq
311 aa
AA seq
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MASQDIIARSATTTPAPSVRNQEEVAKLIDTTKCIGCKACQVACSEWNELRDEVGHNHGT
YDNPQDLSAESWTLMRFTEHETDAGNLEWLIRKDGCMHCAEPGCLAACPSPGAIIKHANG
IVDFDQDHCIGCGYCITGCPFNIPRISQKDHKAYKCTLCSDRVAVGLEPACVKTCPTGAI
VFGSKEDMKTHAAERIVDLKSRGFDNAGLYDPEGVGGTHVMYVLHHADTPSIYAGLPNDP
AISPLVGLWKGISKPLGLLAMGAAVLAGFFHYVRIGPNRTEEDDHPEPPDTSVHVVDPAV
HTFDPRGEDRP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggccagccaagacatcattgcccgctcggccaccacgaccccggcaccttcggtgcgc
aatcaggaggaagtcgccaagctgatcgacaccaccaaatgcatcggctgcaaggcctgt
caggtcgcgtgctcggaatggaacgagttgcgtgacgaggtcggccacaaccacggcacc
tacgacaacccgcaggatttgagcgcagagtcatggaccttgatgcgttttaccgagcat
gaaaccgacgccggaaacctcgaatggctgatccgcaaggacggctgcatgcactgcgcc
gagcccggttgtctggcggcatgcccgagcccgggggcgatcatcaagcacgccaacggc
atcgtcgatttcgatcaggatcactgcatcggttgcggttattgcatcaccggctgcccg
ttcaacattccgcgcatctcgcagaaggatcacaaggcctacaaatgcacgctgtgttcg
gaccgggtggcagtggggctggagccggcctgcgtgaaaacctgcccgaccggggcgatt
gtcttcggctcgaaagaggacatgaagacccacgcggccgaacgcatcgtcgacctcaag
agccgtggtttcgacaatgcaggcctctacgaccctgaaggcgtcggcggtacccacgtc
atgtacgtgcttcatcatgccgataccccgtcgatctacgccggcctgcctaacgacccg
gcaatcagtccgttggtaggcctgtggaaaggcatcagcaaaccgctgggtctgctggcc
atgggcgcggcagtgctggccgggttcttccattacgtgcggatcggcccgaaccgcacc
gaagaggatgaccaccctgaaccacccgacacctcggtacacgtcgtcgacccggcggtg
cacaccttcgatccacgcggggaggaccggccatga
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