Pseudomonas sp. HS6: JJN09_06195
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Entry
JJN09_06195 CDS
T09971
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JJN09_06195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshs03400
]
JJN09_06195
DNA repair and recombination proteins [BR:
pshs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JJN09_06195
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UQS16451
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All DBs
Position
1368812..1369672
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AA seq
286 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDSRSMDPVGYKRVNKVTGKEVTKEH
IVKGVQFEKGRYVVLSEEEIRSAHPVSTQTIDIFAFVDSEQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSKTHKVALARVVLHTRQYLAALMPLESALVLVKLRWPQEVRSLDELALGS
DVSDPKLAKAELDMAKRLVEDMSADWKPEDYTDEFEDKIMALVDKKAHEGKIEDVETVDG
EEERKSADVIDLTELLKRSLGGKSPAKPAKKTASKATAAKKTKKAS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcaatctggaaaggcgcaatcagtttcggtctggtgcacatccccgtggcg
ctggtctcggcaacctcatcccagggtgtggatttcgattggctggacagccgcagcatg
gacccggttggctataaacgggtcaacaaggtcactggcaaggaagtcaccaaagagcac
atcgtcaaaggcgtgcagttcgagaaaggtcgctatgtggtgctcagcgaggaggaaatc
cgttcggcgcacccggtttcgacccagaccatcgacatctttgccttcgtcgacagcgag
cagatcccgctacaaaacatcgacacgccctactacctggccccagacaagcgcggcggc
aaagtctacgcgttgctgcgggaaaccctgagcaagacgcacaaggtcgccctcgcccgc
gtggttttacacacgcgccagtatctggcggcgttgatgccgctggaatcggcactggta
ttggtgaagttgcgttggccccaggaggtgcggagcctcgatgaactggcgctgggcagc
gatgtgagcgacccaaaactggccaaggccgaactggatatggccaagcgccttgtggag
gacatgagcgccgactggaagcccgaggattacaccgacgaatttgaagacaagatcatg
gccctggtggacaagaaggcccatgaaggcaagatcgaggacgttgaaaccgttgacggc
gaagaagagcgcaaatctgctgatgtgatcgacttgaccgaactgctcaagcgcagtctc
ggcgggaaatctccggccaaaccggcgaagaagaccgcgagcaaggctactgcggcgaaa
aagaccaaaaaagcgtcgtaa
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