Pseudomonas sp. HS6: JJN09_06635
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Entry
JJN09_06635 CDS
T09971
Name
(GenBank) efflux RND transporter permease subunit
KO
K07789
multidrug efflux pump
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JJN09_06635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_06635
Transporters [BR:
pshs02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JJN09_06635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UQS16538
LinkDB
All DBs
Position
complement(1474127..1477234)
Genome browser
AA seq
1035 aa
AA seq
DB search
MNLSGPFIKRPVATMLLSLAIMLLGGVSFGLLPVSPLPQMDFPVIVVQASLPGASPEVMA
STVATPLERSFGAIAGVNTMSSRSSQGSTRVILQFDLDRDINGAAREVQAAINASRNLLP
SGMRSMPTYKKVNPSQAPIMVLSLTSDVLEKGQLYDLASTILSQSLSQVQGVGEVQIGGS
SLPAVRIELEPQALNQYGVALDDVRKTIAGANVRRPKGSVEDDQRLWQIQANDQLEKAKD
YESLIIHYNGGAALRLKDVAKVTDGVEDRYNSGFFNDDAAVLLVINRQAGANIIETVNEI
KAQLPALQAVLPASVKLNLAMDRSPVIKATLHEAEMTLLIAVALVILVVFLFLGNFRASL
IPTLAVPVSLVGTFAVMYLYGFSLNNLSLMALILATGLVVDDAIVVLENISRHIDEGVKP
MKAAYLGAKEVGFTLLSMNVSLVAVFLSILFMGGIIESLFREFSITLAAAIVVSLVVSLT
LTPMLCARWLKPHTPGQENRLQRWSRRTNDWMVGKYATSLDWVLRHRRLTLLSLIITVGV
NVALYVVVPKTFLPQQDTGQLIGFVRGDDGLSFSVMQPKMETFRRAVLKDEAVESVAGFI
GGNNGTNNAFMLVRLKPIKERNLSAQKVIERLRKEMPKVPGAQLMLMADQDLQFGGGREQ
TTSQYTYILQSGDLGALREWYPKVVTALRALPELTAIDAREGRGAQQVTLIVDRDQAKRL
GVDMNMVTAVLNNAYSQRQISTIYDSLNQYQVVMEVNPKYAQDPVTLNQVQVITADGARI
PLSTIAHYENSLEDDRVSHEGQFASESISFDMAEGVTVEQGSAAIERAIAKVGLPEDVIA
KMAGTADAFAATQKSQPFMILGALLAVYLVLGVLYESYIHPLTILSTLPSAGVGALLSIY
ALGGEFSLISLLGLFLLIGVVKKNAILMIDLALQLERHQGMAPLESIRSACLQRLRPILM
TTLAAILGALPLLLSRAEGAEMRQPLGLTIIGGLIFSQVLTLYTTPVVYLYLDKARHRFN
KWRGVRTDAALETPL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtccggtcctttcatcaagcgcccggtggcgaccatgctcctgagcctggcg
atcatgctgctgggcggtgtgagcttcggcctgctgccggtgtcgccactgccgcaaatg
gacttcccggtgatcgtggtgcaggcgagcctgcccggcgcgagtccggaagtcatggcc
tcgactgtggcgacgccgctggaacgctcgttcggcgccattgccggcgtcaacaccatg
agcagccgttccagccagggctcgacccgggtcattctgcaattcgacctcgaccgcgac
atcaacggcgcggcgcgagaagtgcaagcggcgatcaatgcctcgcgcaacctgctgccg
agcgggatgcgcagcatgccgacctacaagaaggtcaacccgtcgcaggcgccgatcatg
gtgttgtcgctgacctcggatgtgctggaaaaaggccagctctatgacttggcctcgacc
atcctgtcccagagcctgtcccaggtgcagggcgtcggcgaagtgcagatcggcggcagc
tccctgccggcggtgcgcatcgaactcgaaccccaggcgctgaaccagtacggcgtggct
ttggacgatgtgcgcaagaccatcgctggcgccaacgttcgccggcccaagggttcggtc
gaggacgaccagcgtctgtggcagattcaggccaatgaccaactggagaaagccaaggac
tacgaatcgctgatcatccattacaacggcggtgcggccctgcgtctgaaggacgtggcc
aaagtcaccgacggcgtggaagaccgctacaacagcggctttttcaatgatgacgcggcg
gtgttgctggtgatcaaccggcaggccggcgccaacatcatcgagacggtcaacgagatc
aaggcacagttgccagcgttgcaggccgtgttgccggccagcgtcaaactgaacctggcg
atggatcgctcgccggtgatcaaggccaccctgcacgaagcagagatgaccctgctgatc
gccgtggcgctggtgatcctggtggtgttcctgttccttggcaacttccgcgcatccctg
attccgactttggcggtgccggtgtcgctggtcggcacttttgcggtgatgtacctctac
ggattctcgctgaacaacttgtcgctgatggcgctgattctcgccacgggcctggtggtg
gacgacgccatcgtggtgctggagaacatttcccggcacatcgacgaaggcgtcaaaccg
atgaaagctgcgtatctcggggccaaggaagtcgggttcaccttgctgtcgatgaacgtg
tcgctggtggcggtgttcctgtcgatcctgttcatgggcgggatcatcgagagcctgttc
cgcgagttttccatcaccctggccgcggctatcgtggtgtcgctggtggtttcgctgacc
ctgacgccgatgctctgcgcccgctggttgaagccgcacacgccgggccaggaaaaccga
ctgcagcgctggagccgtcgcaccaacgactggatggtcggcaaatacgccaccagcctc
gactgggtgttgcgtcatcggcgcctgacgttgttgagcctgatcatcacggtcggtgtg
aacgtcgcgctgtacgtggtggtgccgaagacgttcctgccgcaacaggacaccggccag
ttgatcggtttcgtgcgcggtgacgacggtctgtcgttcagcgtgatgcagccgaaaatg
gagaccttccgccgcgccgtgctcaaggacgaagcggtcgagagtgtcgccgggttcatc
ggtggcaacaatggcaccaacaacgccttcatgctggtgcgtctgaaaccgatcaaggaa
cgcaacctgtcggcgcagaaagtcatcgagcgcctgcgcaaggaaatgcccaaggtgccc
ggcgcgcaattgatgctgatggccgaccaggacctgcaattcggtggtggccgtgagcag
accacgtcgcagtacacctacattctgcagagcggtgatttgggcgccttgcgcgagtgg
tacccgaaagtggtcaccgcattgcgcgccttgccggagctgaccgccatcgacgcccgt
gaaggacgcggtgcgcagcaggtgacgttgatcgtcgaccgcgatcaggccaaacgcctg
ggcgtggacatgaacatggtcaccgccgtgctgaacaacgcctacagccagcggcagatt
tccacgatttacgacagcctcaaccagtatcaggtggtgatggaggtcaatccgaaatac
gcccaggatccggtcacgctcaatcaggtgcaggtgatcactgccgatggcgcgcggatt
ccactgtcgaccattgcgcactacgaaaacagcctggaagacgaccgggtcagccacgaa
ggccagttcgcctccgaaagtatttcgttcgacatggccgaaggcgtgacggtggagcag
ggcagtgccgccatcgagcgggcgattgccaaggtcggcttgccggaagacgtgatcgcg
aaaatggccggcaccgccgacgccttcgcggctacccagaagagtcagccgttcatgatc
ctcggcgcgctgctggcggtgtatctggtgttgggtgtgctgtatgaaagctacattcat
ccgttgacgattctgtcgacactgccatcggccggggttggtgcgctgctgtcgatctat
gcgctgggcggcgaattcagtctgatctcgttgctcgggctgttcctgttgatcggtgtg
gtgaagaagaacgcgatcctgatgatcgatctggcgctgcaattggaacgtcatcaaggc
atggcaccgctggagtcgatccgcagtgcctgtttgcaacgtttgcggccgatcctgatg
accacgctggcggcgatcctcggtgccttgccgttgctgctcagccgggccgaaggcgcg
gaaatgcgccagccgctgggcctgacgatcatcggcgggctgattttcagccaggtgctg
accctttacaccacgcctgtggtttacctctatctcgacaaggctcgccaccgcttcaac
aagtggcgtggcgtacgtactgatgccgctctggaaactccgctatga
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