Pseudomonas sp. HS6: JJN09_06890
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Entry
JJN09_06890 CDS
T09971
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JJN09_06890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_06890
Transporters [BR:
pshs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JJN09_06890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_22
AAA_29
AAA_21
AAA_16
Septin
Motif
Other DBs
NCBI-ProteinID:
UQS16584
LinkDB
All DBs
Position
1532187..1534046
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AA seq
619 aa
AA seq
DB search
MLRVFERRLDPFPPDEAPPPPVGLMRFLWACTRGARGYVLALALLSASVSIYEAWLFSFL
GQVVDLLSTWQAGGEVSGQESRVLWGIAIVLLTSIGLVALRTMVQHQILAINLPLRLRWD
FHRLMLRQSLSFFSDEFSGRVTTKVMQTALAVREVLFTLIEIAPGIGVYFIAIIALAGGF
ALKLMLPFLAWVALFGLAMLYFVPRLGQVGQEQAHARSSMTGRISDAYTNITTVKLFSHS
NREAHFARAAMEDFKQTGFRQMRLVSQFEIVNQALVVGLILGAGGYALWLWHQGQVGAGA
VAAITAMALRINGMSHWIMWQMTSLFENIGTVQDGMATLTRGPKVQDAPDAGVLVPSGGA
VTFDNVHFNYNGERQVLDGLSLQIRAGEKIGLVGRSGAGKSTLINLLLRFYDVDSGEIRI
DGQNIAQVTQDSLRSAIGMVTQDTSLLHRSIRDNIAYGRPDASDAQVRSAAVNAQADGFI
SQLSDRQGHTGYDTLVGERGIKLSGGQRQRVAIARVMLKNAPILLLDEATSALDSEVEVA
IQESLDEMMQGKTVIAIAHRLSTIAAMDRLIVMDEGRIIEQGTHAELLERNGTYARLWQH
QSGGFLGEDQRLDEAMDRA
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgcgtgtttgaacgcaggctcgaccccttcccccccgacgaggcgccgccgcca
ccggttggcctgatgcgattcctgtgggcctgcacccgcggcgcccgtggctacgtcctt
gcgcttgcgttgctgagtgccagcgtgtcgatctatgaagcttggttgttttcgtttctc
ggacaagtggtggacttgctctcgacctggcaggccggtggcgaagtgagcgggcaggaa
agtcgagtgctgtggggcatcgccatcgtgctgctcaccagcatcggcctggtggcgttg
cgcacgatggtgcagcaccagattctggcgatcaatctgccgctgcggctacgctgggac
ttccatcgtctgatgctgcggcaaagtctttcgtttttctccgatgagttctccggccgg
gtcacgaccaaagtgatgcagaccgcgctggccgtgcgcgaagtgctgttcaccctcatc
gaaatcgctcccggcatcggcgtttactttattgcgatcatcgcgttggccggtggcttt
gccctgaaactcatgctgccctttcttgcctgggtcgcgctgttcgggttggcaatgctg
tacttcgtgccgcgcctggggcaagtcggacaggaacaggcccatgcgcgctcctcgatg
acggggcgtatttccgacgcctacaccaatatcaccaccgtcaaactgttctcgcactcc
aaccgtgaagcgcacttcgcgcgcgcggccatggaagatttcaagcagaccggttttcgt
cagatgcgcctggtcagccagttcgaaatcgtcaatcaggcgctggtggtcggattgatc
cttggcgcaggcggctatgccctctggctctggcatcagggccaggtcggtgcgggcgct
gtggcggcgatcaccgcgatggcgctgcggatcaatggcatgtcgcactggatcatgtgg
caaatgacgtcgctgttcgaaaacatcggcaccgtgcaggacggcatggcgaccctgacc
cgaggtccgaaggtgcaggatgcgccggacgccggcgtgctggtgccgtccggcggtgcc
gtgacctttgacaacgtgcacttcaactacaacggtgaacgtcaggtgctcgacgggctg
agcctgcagatccgcgcgggcgaaaaaatcggcctggtgggccgctccggagccggcaaa
tccacgctgatcaatctgctgttgcggttctatgacgtcgacagcggcgagattcgcatc
gacgggcaaaacatcgcgcaggtaacccaagacagtctgcgcagcgccatcggcatggtc
acccaggatacgtcgctgctgcaccgctcgattcgcgacaacatcgcgtacggccgcccg
gacgccagcgatgcgcaagtgcgcagcgccgcagtcaatgctcaggccgatggtttcatc
agccaactgagtgatcggcaaggtcacacgggctatgacacgctggtgggcgagcgcggc
atcaagctttcgggtggccagcgccaacgtgtcgccatcgcccgggtgatgctcaagaac
gcgccgatcctgctgctcgacgaggccaccagtgctctggattccgaggtagaagtcgcc
atccaggaaagtctcgatgaaatgatgcaaggcaagaccgtcatcgccatcgcccatcgg
ttgtcgacgatcgcggccatggatcggctgattgtcatggatgagggccgcatcatcgaa
caaggcacccacgccgaactgctggaaagaaacggcacctacgcacgactctggcagcat
cagagcggtggttttctgggtgaggatcaaaggctggatgaggcgatggaccgggcgtga
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