Pseudomonas sp. HS6: JJN09_07085
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Entry
JJN09_07085 CDS
T09971
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshs03400
]
JJN09_07085
Enzymes [BR:
pshs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
JJN09_07085
DNA repair and recombination proteins [BR:
pshs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
JJN09_07085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
UQS16616
LinkDB
All DBs
Position
complement(1571373..1572911)
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AA seq
512 aa
AA seq
DB search
MHTTRRLCLVLGDQLSFDLASLQGLDQERDTVLLVEVMEEASHVPHHPQKIVLIFSAMRH
FAEALQQRGIRVQYVTLDDPENTGSVPSELHRWQSRLQSDELHVTECGDWRLEHSIRDCG
LAITWHSDRRFLCTRADFSHWAQGKKQLRMEFFYREMRRKSRLLLNGDGSPVGGAWNFDA
ENRKALPKGVRPPSPARFTPDAITRDVLALVAKNFSGHYGALDTFDYPVTHAEAQALWDY
FLDWGLAAFGDYQDAMASDEPFLFHARISAALNIGLLDLRQLCSDVESAYWSGNIALNAA
EGFIRQLIGWREYVRGVYWLKMPDYAQGNAFGNTRSLPEFYWTGKTQMNCMRQAISQSLE
HAYAHHIQRLMVTGNFALLAGIAPSEICEWYLAIYMDAFDWVELPNTLGMVMHADGGYLG
SKPYCASGQYIKRMSDYCRGCAYKVSESTTDEACPFNSLYWHFLMRHGDRLRGNQRMSMI
YKNLDRMPDSKQQALWQRGEWLLKQLDDGESL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgcatacgactcgccgattgtgcctcgtcctgggcgaccagttatctttcgacctcgcc
tcgctgcaggggctggatcaagagcgcgatacggtgctcctggtcgaggtgatggaagag
gccagccatgttcctcatcacccgcaaaagatcgtcctgattttcagcgccatgcgtcac
ttcgccgaagcgttgcagcagaggggaatcagggtgcagtacgtaacgctcgatgatccg
gaaaacactggatccgtgcctagcgagttgcaccgctggcagtcacgcctgcaatcggat
gaactccacgtcacggagtgcggtgactggcgactggagcattcaatcagggactgtggc
ttggcgatcacgtggcattccgatcgtcgctttctttgcacacgtgccgatttctctcac
tgggcgcagggcaaaaaacagctgcgcatggagttcttttatcgagagatgcgccgcaag
agcaggttgttactcaatggcgacggcagcccggtcggaggcgcctggaacttcgatgcg
gaaaaccgcaaagccttgcccaagggtgtcaggccgccttcgccagcccgttttacgcca
gacgcaatcacccgggatgtgcttgcgttagttgccaaaaacttctccggtcactatggc
gccctcgacacgttcgactatccggtcacccacgccgaagctcaggccctgtgggattac
tttctcgattggggcctggcagccttcggcgactatcaagacgccatggccagcgatgag
ccgtttctgtttcatgcgcgtataagcgcggcacttaatatcggcttgctggatcttcgc
cagctttgcagcgatgtggaatctgcgtattggtccggcaacattgcactcaacgccgcc
gaaggctttattcgacaactgatcggctggcgtgagtatgtccgaggcgtctactggctg
aagatgcctgactatgcccagggaaatgcctttggtaatacgcggtcgcttccagagttc
tactggacaggcaaaacgcagatgaactgcatgcgccaggctatcagccagagcctggaa
catgcctacgctcaccacatccaacgactaatggtgaccggcaacttcgcactgctcgcc
ggtatcgcaccgagtgaaatatgtgagtggtatctggcgatctacatggacgccttcgac
tgggtagaactacccaatacactgggcatggtcatgcacgccgatggcggctatctcggt
tccaaaccctattgtgcgagcggccaatacatcaagcgcatgtccgactattgccgtggc
tgcgcctacaaagtgagcgaaagcaccaccgacgaagcttgccctttcaactcgctttac
tggcactttctaatgcgtcacggcgaccgactgcgtggcaatcaacgcatgagcatgatc
tacaaaaacctcgaccgcatgcctgattccaaacaacaggcgctttggcaacgcggcgag
tggttgctcaagcaattggacgatggtgagtcgttgtga
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