Pseudomonas sp. HS6: JJN09_08055
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Entry
JJN09_08055 CDS
T09971
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pshs01002
]
JJN09_08055
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
JJN09_08055
Peptidases and inhibitors [BR:
pshs01002
]
Cysteine peptidases
Family C82
JJN09_08055
Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
JJN09_08055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
UQS16796
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All DBs
Position
complement(1760602..1762206)
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AA seq
534 aa
AA seq
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MFKKYACYLSICLLAAPFVVCADEPVSALPTLPAEMPVEPQSPLQAALISLPQACPAIAA
RLGGPALEQLQAFYQQQDWLPVWAAAGQLPQLHAQLQLLADDGLNPKRYPVAETVPQDGD
LCADIDISRNYLQALQDLHYGRLLQSHFEPLWHADEAPRDRQAELLAIAVPGMHDMAAAF
DLARPNLAQYQNLRHLYAAQRLQTLPHWQSVGNGPLLRPDMEDKRVPELAKRLYSEGYLS
SVVGTPDNAYHGVLVEAVKSFQANHSLQADGVVGPGTIAEMNISPLTRREQLRVNLERFR
WLAQDMEPDGLLVNVAAAELTLYQGGQPVWQTRTQVGRAERQTPLLKSRVTRLTLNPTWT
VPPTIWKEDKLPAIRKDQTFLSRQNLQVLDANGQPLAAADIDWDNPGNILLRQDAGPRNP
LGQMVIRFPNPFSVYLHDTPSKALFDKGPRAFSSGCVRVEHPMKLRDFLLSPAERARTDT
LLATGTTHEFRLSNPVPILMTYWTAQVDGKGRVLYAPDIYSRDSALLAGLDRAH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaagtacgcatgctacttgagcatttgtttgctcgctgcgccgtttgtcgtt
tgtgccgatgagcctgtatcggcactcccgacgctgccggcagaaatgcctgtcgagccg
caaagcccgctgcaggccgcgttgatcagcctgccgcaggcctgtccggcgattgccgcc
cgtctcggcggcccggcgctcgaacagttgcaggcgttctatcaacagcaggactggttg
ccggtatgggcggcggccgggcaattgccgcaattgcacgcgcaattgcagctgctggcc
gacgatggcctcaatccgaaacgctatccggttgcggaaacagttccgcaggacggcgat
ctgtgcgccgacatcgacataagtcgcaactacctgcaagccttgcaggacctgcattac
ggtcgtctgcttcaatcgcacttcgaaccgctgtggcacgccgacgaagcgccacgtgac
cgtcaggccgaattgctcgccatcgctgtgccgggcatgcatgacatggcggcggccttc
gacttggcgcggccgaacctggcgcaatatcagaacctgcgtcacctctatgccgcacaa
cgcctgcaaaccttgccgcactggcagtcggtgggcaacgggccgctgctgcgcccggac
atggaagacaaacgcgtaccggaactggccaagcggctttacagcgaaggttatctgagc
agtgtggtcggtacgccggacaatgcttatcacggtgttttggtcgaggcggtgaaaagc
ttccaggccaaccattcgttgcaggccgacggtgtggtcgggccggggacgattgccgag
atgaacatcagcccgctgacgcgtcgcgaacagcttcgggtcaaccttgagcgtttccgc
tggctggcccaggatatggagcccgatggcctgctggtcaacgtcgccgccgccgaactg
actctgtaccagggcggccagccggtgtggcagacccgcacccaggtcggtcgcgccgag
cgccagacgccgttgctcaaatcccgggtcacgcgcctgacactgaacccgacctggacc
gtgccgccgaccatctggaaagaagacaaactgccggcaatccgtaaggatcagaccttc
ctcagccgccagaacctgcaggttctcgacgccaacggtcagccgctggccgctgccgac
atcgactgggacaaccccggcaacatcctcctgcgtcaggacgccgggccgcgcaatccg
ctggggcaaatggtcatccgtttccccaacccgttttcggtgtacctgcatgacacgccg
agcaaggcgctgttcgacaaaggtccacgggcgttcagttccggttgtgtgcgggtcgag
catcctatgaaactgcgcgacttcttgcttagcccggcggaaagagcccgtaccgacacc
ttgctcgccaccggcaccacccatgaattccgcctgagcaacccggtgccgatcctgatg
acttattggacggcacaggtcgacgggaagggccgcgtgctctacgcgccggacatctac
agccgtgacagcgcgctgctggcggggctcgaccgggcgcattga
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