Pseudomonas sp. HS6: JJN09_08260
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Entry
JJN09_08260 CDS
T09971
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02025
Biofilm formation - Pseudomonas aeruginosa
pshs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JJN09_08260 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
JJN09_08260 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pshs02044
]
JJN09_08260 (tssH)
Secretion system [BR:
pshs02044
]
Type VI secretion system
Imp/Vas secretion system core components
JJN09_08260 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
Clp_N
AAA_22
AAA_16
nSTAND3
Zeta_toxin
AAA_7
AAA_14
AAA_25
ResIII
T2SSE
ClpB_D2-small
IstB_IS21
Sigma54_activat
AAA_28
NACHT
SRP54
AAA_23
FtsK_SpoIIIE
AAA_24
IPT
Motif
Other DBs
NCBI-ProteinID:
UQS16834
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All DBs
Position
1806749..1809289
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AA seq
846 aa
AA seq
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MELASLIGRLNPDNRRALERAAQRCLQRGHHFVEIEHLLLELLDIEGGDFAFLLPRFGLE
RDALTAEINKALDLFKAGSTRTPALSSHTLGLLEDAVVQASVLGVDSIRSGLLLLALIDR
DERRSLLLNSASSLLRIPKEALRANLLEWTESSREHVGPRSVSSGNPAPRQDSVLDQYTQ
DLTADAHAGRIDPIVGRDGEIRQCIDILLRRRQNNPILVGAPGVGKTAVVEGLALRIAAG
DVPPSLQEVSLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSADKPIILFIDEAHTLIGA
GGAEGGSDAANLLKPALARGELRTLAATTWMEYKKYFEKDPALARRFQLVQVEEPDEITA
VEMLRGVAAKLEQHHGVLVLDAAIHEAVKLSHRYISGRQLPDKAISVLDTACARVALGQH
DVPPPLESLRHRQQSLKEEVERLRREQATGLDHRERITLLESESKTNVQAIRELETRWSE
ERVAVRELLDTRRELLDLSERADSEKPDEATDSRIDHLAAELLRLEAGLDAIRQDDPLVP
EQVDSKTVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGLRVMGQTTALATIAQRLQAYR
AGLTDPQKPVGVFLLVGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHTVSQLKG
APPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGLMEDGTGLVVD
FKNTVMLATSNVGAELLLDTPVAHIGSEAFNEALHKVLLQAFRPAFLARMTVVAYRPLDE
STLEGIVLAKLEKLRGRYKAATGKQFEFDSGIVKAVLAKCSAAGARDVENVLMTQVTGKL
AEWVLE
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atggaactggccagcctgatcggacgcctcaacccggacaaccgccgcgccctcgaacgc
gccgcgcaacggtgcttgcagcgcgggcatcactttgtcgagatcgagcatttgttgctg
gaactgctcgacatcgagggcggtgattttgcgtttctgctgccgcgtttcgggctggag
cgggatgcactgacggctgaaatcaacaaggcgctggatctattcaaggcggggagcacc
cgcacaccggcgctgtcctcccacacgctgggattgttggaagacgccgtggtacaggcc
agtgtgctgggggtggacagtattcgttccgggctgctgttgctggcattgatcgatcgc
gacgaacgccgcagcttgttgctcaacagtgcttcgtcattgttgcggattccgaaagaa
gccctgcgcgcgaacctgctggagtggacggaaagttcccgcgagcacgtcggcccgcgc
tcagtgtcttctggaaatcctgcgccgcgacaggactcggtactggatcaatacacccag
gacctgaccgccgacgcccacgccggacgcatcgatccgatcgtcggccgcgacggcgaa
atccgccagtgcatcgatattcttttgaggcgccggcaaaacaatccgattctggtcggc
gcacccggtgtgggcaaaaccgccgtggtcgagggcctggcgctgcgcatcgctgccggg
gacgtgccgccctccttgcaggaagtcagtctgcgggtgctcgacctcggtctgttgcag
gcaggcgcgggagtcaaaggtgaattcgaacaacggctcaaaggggtgatcgacgcggtg
cgcagcgccgataagccgatcatcctgttcatcgacgaggcgcacaccttgatcggcgct
ggcggagccgagggtggcagcgatgcggccaacttgctcaaaccggcgctggcccgtggt
gagctacgcacgttggccgccacgacctggatggaatacaagaaatacttcgaaaaagac
ccggccctcgcccgccgcttccagcttgtgcaagtggaggagccggacgaaatcaccgcc
gtggaaatgctccgtggcgtggccgccaagctcgaacaacaccacggcgtgctagtgctg
gatgcggcgatccacgaagcggtgaagctatcgcaccgctacatctccggccgccagttg
ccggacaaagccatcagcgtcctcgacaccgcgtgcgcccgcgtcgccctcggccagcac
gacgtgccgccaccgctggagagcctgcgccatcgccagcaaagcctgaaagaagaagtt
gagcgcctgcgtcgtgaacaggccactgggctggatcaccgcgagcgcatcaccctgctg
gaaagtgaatcgaagaccaacgtccaggcgatccgtgaactggaaacccgctggagcgaa
gagcgcgtcgccgtgcgcgaactcctcgacacccgccgcgaactgctcgacctcagtgaa
cgcgccgacagtgaaaaacccgacgaagccaccgacagtcgcatcgaccatctggccgcc
gaactgctgcgcctggaggccgggcttgatgcgattcgccaggacgatccgctggtgccc
gagcaagtcgacagcaaaaccgtcgctgccgtgatcgcgggatggacgggcattccggtc
ggcaaaatgctcgccgacgaagcccacgcagtgcgcacgcttggccagcgcatgggcttg
cgcgtgatgggccaaaccacggcgctcgcgaccatcgcccagcgcctccaggcctaccgc
gccgggctgaccgatccgcagaaaccggtcggtgtgttcctgctggtcggccccacgggt
gttggcaaaaccgaaaccgcgtatgcgttggccgacgcgttgtacggcggcgaacgcaac
ctgatcagcatcaacctctccgaataccaggaagcccacaccgtcagccaactcaaaggc
gcgccgcccggctatgtcggttatggcagcggtggcgtgctgaccgaggcggtgcggcgc
aaaccgtattcggtggtgttgctggatgaaatcgagaaggcacacccggatgttctggaa
gcgttctacaacgtgttcgacaaaggcttgatggaggacgggacggggctggtcgtcgat
ttcaaaaacaccgtgatgctcgccaccagtaacgtcggggctgaactgttgctcgacacc
ccggtggcacacatcggctccgaagcgttcaacgaagcgctgcacaaagtcctcctgcaa
gcgttccgcccggcgtttctggcacgcatgacggtggtcgcgtaccggccgctggatgag
tcgaccctggaagggattgtgctggcgaagctggagaaattgcgcgggcgctacaaggcg
gcgaccggcaaacagttcgagtttgattcgggaattgtgaaagctgtgctcgccaaatgc
agcgctgccggcgcgcgggatgtcgagaatgtattgatgacgcaggtgacggggaaattg
gcggaatgggtgttggagtga
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