Pseudomonas sp. HS6: JJN09_09015
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Entry
JJN09_09015 CDS
T09971
Symbol
icd
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00020
Citrate cycle (TCA cycle)
pshs00480
Glutathione metabolism
pshs00720
Other carbon fixation pathways
pshs01100
Metabolic pathways
pshs01110
Biosynthesis of secondary metabolites
pshs01120
Microbial metabolism in diverse environments
pshs01200
Carbon metabolism
pshs01210
2-Oxocarboxylic acid metabolism
pshs01230
Biosynthesis of amino acids
pshs04146
Peroxisome
Module
pshs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pshs_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JJN09_09015 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
JJN09_09015 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JJN09_09015 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JJN09_09015 (icd)
Enzymes [BR:
pshs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
JJN09_09015 (icd)
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Motif
Pfam:
Iso_dh
tRNA_synt_1c_R1
SHOCT_2
Motif
Other DBs
NCBI-ProteinID:
UQS16979
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Position
complement(1953432..1954688)
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AA seq
418 aa
AA seq
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MGYKKIQVPAVGDKITVNADHSLNVPDNPIIPFIEGDGIGVDVSPVMIKVVDAAVAKAYG
GKRKISWMEVYAGEKATQVYDQDTWLPQETLDAVKDYVVSIKGPLTTPVGGGIRSLNVAL
RQQLDLYVCLRPVVWFEGVPSPVKKPGDVDMVIFRENSEDIYAGIEWKAGSPEATKVIKF
LKEEMGVTKIRFDQDCGIGIKPVSKEGTKRLVRKALQYVVDNDRKSLTIVHKGNIMKFTE
GAFKDWGYEVAKEEFGAELLDGGPWMKFKNPKTGREVIVKDAIADAMLQQILLRPAEYDV
IATLNLNGDYLSDALAAEVGGIGIAPGANLSDTVAMFEATHGTAPKYAGKDQVNPGSVIL
SAEMMLRHLGWTEAADLIIKGTNGAIKAKTVTYDFERLMEGATLVSSSGFGEAIIKHM
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgggttacaagaagattcaggttccagccgtcggcgacaaaatcaccgtcaacgcagac
cattctctcaatgtccctgataacccgatcattcccttcattgaaggtgacggcattggc
gtcgacgtcagccctgtgatgatcaaagtggttgatgctgccgtggccaaggcctacggg
ggcaagcgcaagatttcctggatggaggtttatgctggcgaaaaagcaactcaagtctat
gaccaggacacctggctgccccaggaaaccctggacgccgtcaaggattacgtcgtttcc
atcaagggcccactgaccactccggtcggtggcggcatccgctccctcaacgttgccctg
cgccaacagctcgatctctatgtctgcctgcgcccggttgtgtggttcgaaggcgtgccg
agcccggtgaaaaagcctggcgacgtcgacatggtgatcttccgcgagaactccgaagac
atctatgccggtatcgaatggaaggccggctctcctgaagccaccaaggtcatcaagttc
ctgaaggaagaaatgggcgtcaccaagatccgtttcgatcaggattgcggtatcggcatc
aagcctgtttcgaaagaaggcaccaagcgtctggtgcgcaaggccctgcaatacgtcgtg
gacaacgaccgcaagtcgctgaccatcgtgcacaagggcaatatcatgaaattcaccgaa
ggtgccttcaaggactggggctacgaggtggcgaaggaagaattcggcgccgagctgctc
gatggcggcccgtggatgaaattcaagaacccgaaaaccggccgtgaagtcatcgtcaag
gacgccatcgccgacgccatgctccagcaaatcctgctgcgtccggccgaatacgatgtg
atcgccacccttaacctcaacggcgactacctgtccgacgccctggcggcggaagtgggc
ggtatcggtatcgcgccgggtgccaacctgtccgacaccgtggccatgttcgaggcgacc
cacggtactgcgcccaagtatgctggcaaggaccaggtcaacccgggttcggtgattctg
tcagccgagatgatgctgcgccacttgggctggaccgaggcggctgacctgatcatcaag
ggcaccaatggcgcgatcaaggccaagaccgtgacctacgacttcgaacgtctgatggaa
ggcgccacgctggtgtcttcttcgggcttcggtgaggcgatcatcaagcacatgtaa
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