Pseudomonas sp. HS6: JJN09_10070
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Entry
JJN09_10070 CDS
T09971
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00300
Lysine biosynthesis
pshs00470
D-Amino acid metabolism
pshs01100
Metabolic pathways
pshs01110
Biosynthesis of secondary metabolites
pshs01120
Microbial metabolism in diverse environments
pshs01230
Biosynthesis of amino acids
Module
pshs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JJN09_10070 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JJN09_10070 (lysA)
Enzymes [BR:
pshs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JJN09_10070 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
UQS17177
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Position
2199973..2201232
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AA seq
419 aa
AA seq
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MTQDLFDSITRVSRSVGTPFWLYDAKIFRRQIRRLESFDVIRYAQKACSNIHILSLMREE
GVLVDSVSLGEVERAISAGYPTQGPHSPIVFTADLIDRTTLPRLAELKIPVNAGSPQMLE
QLGSVSPGHEVWLRVNPGFGHGHTRKTNTGGEHSKHGIWYTEIGNSVELIRRHGLKLVGL
HMHIGSGADYEHLAQVCDAMVNQVKQLGVDISAISAGGGLSVPYADGEEEINTEHYYELW
DSARREIEQFLGHPVSLEIEPGRYLAAQAGILVAEVRAYKQMGSNAFVLVDAGFNDLMRP
AMYGSAHRVSVMTSTGQIKREGLRPTVIAGPLCESGDVFTQKEGGEVITQMLPEVEVGDL
LIFHDCGAYGASMSSNYNTRPLIPEVLKDGDELKVIRKRQTFNDLLHLELDAGQSLPTG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagatctgttcgactccatcacccgggtgagccgctcggttggcaccccgttc
tggttgtacgacgcgaaaatctttcgccggcaaatccggcgactggagtcctttgacgtc
atccgttatgcgcaaaaggcttgctccaatatccatatcctctcgttgatgcgcgaagaa
ggcgtgttggtcgattccgtatcgctgggcgaagtcgagcgggccatcagtgcgggttat
ccgactcaaggccctcactcacccatcgtgttcaccgctgacttgattgaccggaccacc
ctccctcgactggccgaactgaaaataccggtcaacgcaggctctccacagatgcttgaa
caactgggcagcgtcagccctgggcatgaggtgtggttacgggtcaacccgggcttcggc
catggccatacgcgcaagacgaataccggcggggaacacagcaaacacgggatctggtac
accgagatcggtaacagcgtggagttgatccgccgccatggcctgaaactggtgggtctg
cacatgcacattggatcgggcgccgattacgagcacctggcacaggtctgcgatgccatg
gtcaaccaggtcaagcaactgggggttgatatcagcgccatctcggctggcggtggcctg
tcggttccctacgcggacggcgaggaggaaatcaacaccgaacattattacgagctctgg
gattcggcacgtcgtgaaatcgaacagttccttggccatcccgtcagcctggaaatcgaa
ccgggtcgctatctcgcagcgcaagccggcatcctggtcgcagaagtgcgagcttataaa
caaatgggcagcaatgccttcgtcctcgtcgacgctggcttcaacgatctgatgcgaccc
gccatgtacggctcggcacatcgcgtgagcgtcatgacctcgaccgggcaaatcaagcgc
gagggcctgcggccgaccgtaattgccggccccctctgtgagtcgggcgacgttttcacc
caaaaagaaggtggagaagtcatcacccaaatgctgccggaggtcgaagtcggcgacctg
ttgatctttcacgactgcggagcttatggcgcaagcatgtcgtccaactacaatacgcgt
ccattgatcccggaagtcttgaaagatggcgatgaactgaaagtcatcagaaagcgccag
acgttcaatgaccttctgcacctggaacttgacgcgggccagtcactgccgacgggctga
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