Pseudomonas sp. HS6: JJN09_10760
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Entry
JJN09_10760 CDS
T09971
Name
(GenBank) DEAD/DEAH box helicase family protein
Organism
pshs
Pseudomonas sp. HS6
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
UQS17308
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Position
2334676..2337366
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AA seq
896 aa
AA seq
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MSPPLSKPLASSWVSRFKEQSLERGRRYALENRVRIVQVGDATITASCEGSGGNIYRQTI
HLRESAKGTLLMVDATCTCPVHSNCKHCAAVLLQVQETLEYPAAAKDAELLEKLQAVLEN
RSPKAPPQVLVDNVQPVPRLWLASVEFSAFEPRNGKMQRYIQHRAALSFSYLDEYVSGQK
NSDILIRQEAQTLRVKRHPDVEQSYREQLRILGFRIATRQSKALPESAGELYEMVNDSAW
LTFTLNDLPKLRTQGWELLVDDEFGFDLTAVDDWYATVEQVPERDWFDLELGIIVNGERL
SLLPILLNLMRSHAEILNPERLARRRDDELILVNIPQRNSEHGPLQVALPLGRLKPVLAT
LGEFYLQEPGETTLRLSKADAIRLNSLEGIPLLWEGGEQIRSFAQRLRDIRDYSAEAPEG
LNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNAGRLDRPCMVV
MPTSLIPNWLDEAAHFTPQLKVVALYGASRKKHFENLADYDLILTTYALLPKDVERLAKQ
PLHVLVLDEAQYIKNPNSKAAQAARELNARQRLCLSGTPLENHLGELWSLFHFLLPGWLG
DVKSFNADYRVPIEKRASEVRLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVDLNEA
QRDVYETMRLAMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVSDATLPARGST
SGKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEDELKKRNVAYALLTGQTRDRRTPVK
EFQSGKRQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATENQATDRAYRIGQEKPVFVY
KMIARGTVEEKIQHLQKEKSDLAAGVLDGRKAGDWKLQSDDIEALFAPLPDKLDKR
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgtccccgcctctgagtaaaccgctggcctcctcctgggtcagccgattcaaggaacaa
agcctggagcgtggccgccgctacgcgctggaaaaccgggtgcggatcgtgcaggtcggc
gatgcgaccattaccgccagttgcgaaggctctggcggtaacatttatcgtcagacgatt
catctgcgcgagtcggccaaaggcacactgctgatggtcgacgccacgtgcacctgcccg
gtccacagcaactgcaaacactgtgcggcggttttgctgcaggtgcaggaaaccctcgaa
tatccggctgccgccaaagacgccgaactgctggaaaaactccaggcagtcctcgagaac
cgcagccccaaggcgccgccgcaagtactggtggacaacgtgcaaccggtgccgcgcctg
tggctggccagcgtcgagttcagtgcgttcgaaccgcgtaacggcaaaatgcagcgctac
atccagcatcgtgcggcgctgtctttcagctacctcgacgaatacgtcagcggccagaaa
aacagcgacatcctgattcgccaggaagcccagaccctgcgggtcaaacgccatccggat
gtcgagcaaagctaccgcgagcaattgcggattctcggctttcgcatcgccacccgacag
agcaaggctctgccggaaagcgccggcgaactctatgaaatggtcaatgacagcgcctgg
ctgacgtttaccctgaacgacctgccgaagctgcgcactcaaggttgggagctgttggtc
gacgatgaatttggcttcgacctgacagccgtcgatgactggtatgccacggtcgagcag
gtcccggaacgggactggttcgatcttgagctgggcatcatcgtcaatggcgaacgcctc
agcctgctgccgatcctgctcaacctgatgcgctcgcacgcggaaatcctcaaccccgaa
cgccttgcccggcgacgggacgacgagctgattctggtgaacattccgcagcgcaacagc
gagcacggccctttacaagtcgccctgccccttggccggttgaaaccggtgctggcaacg
ctgggcgagttctatctgcaagagccgggcgaaaccaccctgcgcctgagcaaggctgac
gccatccgcctcaactcgctggaaggcatcccactgctgtgggagggtggcgagcagatc
cgcagcttcgcccaacgcctgcgcgatatccgcgactacagcgccgaggcgccggaagga
ctgaacgcgacactgcggccttatcagctcgaaggcttgagctggatgcagtcgttgcgg
caacttgaggttggtggaattctcgcggacgacatgggcctgggcaaaaccctacagact
ctggcgcacattctcagcgagaaaaatgccgggcgactggatcgcccctgcatggtggtg
atgcccaccagtctgattcctaattggctggacgaagcggcacacttcacgccacagctc
aaagtggttgccttgtacggcgccagtcgtaaaaagcacttcgaaaatctggccgattac
gacctgatcctcacgacctatgcgctgctgcccaaggatgtcgaacgcctggcaaagcag
cctctgcatgtattggtgctggatgaagcgcaatacatcaagaacccgaacagcaaagcg
gcgcaggctgcccgcgaactgaacgcccgccaacgcctatgcctcagcggtacgccgctg
gaaaaccacctgggcgagctgtggtcgctgtttcactttctgctgcccggctggctcggc
gacgttaaaagtttcaatgccgattaccgcgtgccgatcgaaaaacgcgccagcgaagtc
agacttcaacacctcaacggtcggatcaaaccgtttctgctgcgccgcaccaaggaacag
gtcgcgaccgagctgccgccgaaaaccgagatcatccactgggtcgacctcaacgaggcc
cagcgcgatgtgtacgaaaccatgcgcctggccatggacaagaaggttcgcgacgagatc
acccgcaaaggcgtggcgcgcagtcagatcatcattctcgaagcgttgctcaagctgcgt
caggtttgctgcgacttgcgcctggtcagcgacgccaccctgcccgctcgcggcagcacc
tcgggcaagctcgacagcctgatggaaatgctcgaggagttgtttgaggaaggacggcga
atcctgctgttttcgcagttcacttcgatgctgtcactgatcgaggatgaactgaaaaaa
cgcaacgtcgcctatgcgttgctgacgggacagactcgggatcggcgcacgcctgtgaag
gaattccagagcggcaagcgtcagatctttcttatcagtcttaaggctggtggcgttggt
ctgaacctgacggaagcggacaccgtgattcactacgatccgtggtggaacccggcgacc
gagaatcaggcaaccgaccgtgcgtatcgcattggtcaggagaagccggtattcgtctac
aagatgattgcccgggggacggtcgaggagaagattcagcatcttcaaaaggaaaagtcc
gacctggcggccggtgtgctggatgggcgcaaggctggggactggaagttgcagagtgat
gatatcgaggcactgtttgcgccgttgccggacaagctcgacaagcgctga
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