Pseudomonas sp. HS6: JJN09_10815
Help
Entry
JJN09_10815 CDS
T09971
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00071
Fatty acid degradation
pshs00280
Valine, leucine and isoleucine degradation
pshs00310
Lysine degradation
pshs00362
Benzoate degradation
pshs00380
Tryptophan metabolism
pshs00410
beta-Alanine metabolism
pshs00640
Propanoate metabolism
pshs00650
Butanoate metabolism
pshs00907
Pinene, camphor and geraniol degradation
pshs00930
Caprolactam degradation
pshs01100
Metabolic pathways
pshs01110
Biosynthesis of secondary metabolites
pshs01120
Microbial metabolism in diverse environments
pshs01200
Carbon metabolism
pshs01212
Fatty acid metabolism
Module
pshs_M00087
beta-Oxidation
pshs_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JJN09_10815 (fadB)
00650 Butanoate metabolism
JJN09_10815 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
JJN09_10815 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
JJN09_10815 (fadB)
00310 Lysine degradation
JJN09_10815 (fadB)
00380 Tryptophan metabolism
JJN09_10815 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
JJN09_10815 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
JJN09_10815 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JJN09_10815 (fadB)
00930 Caprolactam degradation
JJN09_10815 (fadB)
Enzymes [BR:
pshs01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
JJN09_10815 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
JJN09_10815 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
JJN09_10815 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
JJN09_10815 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UQS17318
LinkDB
All DBs
Position
complement(2346835..2348982)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADYRVMSTKAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRPEEAL
KVGAVDAVVAPEKLQDAALELIKRAISGEFDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEDKVK
EDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVLEVLKPIVYEQREVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGALYHPTAKLREMAKTGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagctcttgaaagtggcatcgtcgaattg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaactg
cgtcaggccgtagacaccatcaaggcagatgcttcgatcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgaatttgtcgacaacttcaagctg
ccggatgccgagctggttgctggcaatctcgaagccaacaagatcttcagcgatttcgaa
gacctcaacgttccgactgtcgccgcgatcaacggcattgccctgggtggcggtctggaa
atgtgcctggccgcggactaccgcgtcatgtccaccaaggccaagatcggtctgccagaa
gtcaaactgggcatctacccaggcttcggcggtaccgtgcgtctgccgcgcctgatcggt
gccgacaacgccattgagtggattgccgccggcaaggaaaaccgtcctgaagaggcgctg
aaagtcggcgccgtcgatgccgtggttgctcccgagaagctgcaggatgctgcccttgag
ctgatcaagcgcgccatctccggcgagttcgactacaaggccaagcgccagccgaagctg
gaaaagctcaagctgaacgccattgagcaaatgatggctttcgaaaccgccaaaggtttc
gtggcgggccaggcgggtcctaactacccggccccggtcgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaagcactggaagtcgaagccgcaggtttcgtgaaa
ctggccaagacctctgccgcgcagagcttgatcggtctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgatgaaatcgccaaggacgtgaagcaggctgccgtactg
ggcgcaggcatcatgggtggcggtatcgcctatcagtcggcctccaaaggtacgccgatc
ctgatgaaggacatcaacgagcacggtatcgagcaaggtctggcggaagccgccaagctg
ctggtcggtcgcgttgataaaggccgcatgaccgccgcgaaaatggctgaagtgctcaac
ggcattcgtcctacgctgtcctacggcgatttcggtcacgtcgacctggtcgttgaagcc
gtggtcgagaacccgaaagtcaagcaagccgttctggcggaagtcgaagacaaggtcaaa
gaggacaccatcctcgcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgagctggctgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtcgtcaacgactgcccgggcttcctggtc
aaccgcgtactgttcccgtacttcggcggtttcgccaagctggtcagcgccggtgtggac
ttcgtccgtatcgacaagatcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacactggccaccacggtcgtgacgtgatggctgagggattc
ccggatcgcatgaaggacgatcgtcgttcggccatcgacgtgctttacgaagccaaacgt
ctgggtcagaagaacggcaagggcttctatgcctacgaggccgacaagaaaggcaagcag
aagaaagtcgccgacccgtcggtactggaagtgctcaagccgatcgtctacgagcagcgt
gaagtcactgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgctgccgaagccgacatgggtctggtctac
ggtattggtttccctccattccgtggcggtgcgctgcgttacatcgattcgatcggtgtt
gccgagtttgttgccctggccgaccagtacgctgatttgggcgcgctctaccacccgacc
gcgaagctgcgtgaaatggccaaaaccggccaacggttcttcggttaa
DBGET
integrated database retrieval system
