Pseudomonas sp. HS6: JJN09_10835
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Entry
JJN09_10835 CDS
T09971
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
JJN09_10835
Enzymes [BR:
pshs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
JJN09_10835
Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
JJN09_10835
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
AAA_lid_9
Cucumo_coat
Motif
Other DBs
NCBI-ProteinID:
UQS17322
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Position
2352701..2354629
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AA seq
642 aa
AA seq
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MRSRLFSVLSCLLLTAAAAQSAQAVDLSTQRQYYDEAKRALAKGDTGPYFRYSQALADYP
LEPYLAYDELTARLKTASNAEIEKFLAEHGDLPQANWMKLRWLRWLADRGEWATFVKYYD
PKLNFTELDCLNAQYQISSGRKAEGYANADKLWLTGKSQPAACDALFGIWAADGQLTEQK
RWERTKLAAQTRNYPLANSLVNGLTTLAPRGRLLVDVAQKPELLNQPSRFTPADEPMSDI
VSLGLRRLARQDPDKAMDLLDGYASSMHFSRDEKVAIAREIGLTLARRFDSRALDVMTKY
DPELRDNTVSEWRLRLLLRLARWDDAYQLTRRLPQDLATTNRWRYWQARSLELAQPQNPE
AQTLYKSLARERDFYGFLAADRSQLPYSLVNKPLVLSQATINKVRNTPGVRRALEFHARG
QIVDGRREWYHVSRHFNRDEMVAQAKLAYDLKWYFPAIRTISQAQYWDDLDIRFPMAHRE
TLVREAKVRGLHSSWVFAITRQESAFMDDARSGVGASGLMQLMPGTAKETARKFSIPLAS
PQQVLDPDKNIQLGAAYLSQVHSQFNGNRVLASAAYNAGPGRVRQWLRGADHLSFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNSPQPLVDWHERYFDDQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcgccttttcagtgttttgtcctgtttgctactcaccgccgctgctgcccaa
tccgcccaggcggtggacctgtccacccagcgccagtattacgatgaggccaaacgcgcc
ctggccaagggcgacaccggcccgtattttcgctacagccaggccctcgccgattatccg
ctggagccgtatctggcgtacgacgagctgaccgcccgcctgaagaccgcgagcaacgcg
gagatcgaaaaattcctcgcagagcacggtgacctgccccaggccaactggatgaagctg
cgctggttgcgctggctggccgaccgtggcgaatgggcgaccttcgtcaaatattacgac
ccgaaactcaatttcaccgagctggactgcctgaacgcgcagtaccagatcagcagcggc
cgcaaggccgagggttacgccaacgccgacaaattgtggctgaccggcaaatcgcaaccg
gcggcgtgtgatgcgctgttcggaatctgggccgccgacggtcagttgaccgagcaaaaa
cgctgggaacgcaccaaactcgccgctcagacacgcaactatccgctggccaacagtctg
gtcaacggcctgaccacccttgccccgcgtgggcgcctgctggtggatgtggcgcagaaa
ccggagctgctcaaccagccgtcgcgcttcaccccggccgacgaaccgatgtcggacatc
gtcagcctcggcctgcgccgcctggcgcgtcaggacccggacaaggccatggacctgctc
gacggctacgccagcagcatgcatttctcccgcgatgaaaaagtcgcgatcgcacgggaa
atcggcctgactctggcccgtcgtttcgacagccgcgcgctagacgtgatgaccaaatat
gacccggaactgcgcgacaacaccgtttctgaatggcgcctgcgtctgctgctgcgtctg
gcgcgctgggacgacgcctaccaactgacccgccgtctgccgcaggatctggccaccacc
aaccgctggcgttactggcaagcccgcagcctggaactggcacaaccacagaacccggaa
gcgcagacgttgtacaagagcctcgcacgggaacgggatttctacggtttccttgccgcc
gatcgctcgcagctgccctattcgctggtcaacaaaccgttggtactcagccaagccacc
atcaacaaggtgcgcaacacgcccggcgttcgccgcgcgctggagttccacgcccgcggg
cagatcgtcgatggccgacgcgagtggtatcacgtcagccgtcatttcaatcgcgatgaa
atggtcgcccaggccaaactggcctacgacctgaagtggtacttcccggcgatccgcacc
atcagccaggcgcaatactgggacgacctggacatccgcttcccgatggcccaccgcgaa
accctggtgcgtgaagccaaggtacgcggcctgcattcgagctgggtgttcgccatcacc
cgtcaggaaagcgcgttcatggacgacgcccgctccggcgtcggcgccagcggtctgatg
caactgatgcccggcaccgccaaggaaaccgcacgcaaattcagcattccactggcctca
ccgcagcaagtgctcgatccggacaaaaacatccagctcggcgctgcctacctgagtcag
gtgcacagccagttcaacggcaaccgcgtgctcgcctccgccgcctacaacgccggcccc
ggccgagtgcgccagtggttgcgcggcgccgatcacctgagcttcgacgtgtgggtggaa
agcatcccgttcgacgaaacccgccagtacgtacagaacgtgctgtcttactcggtgatc
tacggccagaaactcaactcgccgcaaccgctggtggactggcatgagcggtactttgac
gatcagtga
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