Pseudomonas sp. HS6: JJN09_10995
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Entry
JJN09_10995 CDS
T09971
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs00550
Peptidoglycan biosynthesis
pshs01100
Metabolic pathways
pshs01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JJN09_10995 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JJN09_10995 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
JJN09_10995 (mrdA)
Enzymes [BR:
pshs01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JJN09_10995 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pshs01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JJN09_10995 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UQS17353
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All DBs
Position
complement(2392533..2394425)
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AA seq
630 aa
AA seq
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MPEPIPIKDHEKETRLVNKRLVACALFVFAISCALVVRLYILQVVEFDYHSTISENNRVH
VLPIPPTRGLIYDRNGVLLADNRPSYNLIITRERATDVNQELNEVISLLHLPAEDRTVFD
KAMKQSRHPFTPVTLFYELTEEQIAVLAVNEFRLPGLDVEPQFVRNYPLGAHFAHSIGYV
GRINEKESKTLDSVEYRGTQSIGKTGIERFYEPQLHGHVGYEEVETNAQGRVLRVLKHTD
PIPGKNIVLSLDIKLQEAAEAALGDRRGSVVALDPSTGEVLAMVSNPSFDPNLFVTGISS
KEYSALRDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDAGVVTPQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESPGLMPSQAWKRATRRQAWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTVDGVPPVDEHPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIAISVMIENGEAGGRVAGPVVR
QIMDAWLLDQDGHLKPQYAAPTKAPGDPQV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccaatccccatcaaggatcacgaaaaagaaacgcgtctggtcaacaaacgg
ctggtcgcctgtgccttgttcgtcttcgcaatcagctgtgcactggtggtgcggctgtac
atcctgcaagtggtggaattcgactaccactcgaccatctccgaaaacaaccgtgtccac
gtcctgccgatcccgccaacgcggggactgatttacgaccgcaatggcgttttgcttgcc
gacaaccgtcccagctacaacctgatcatcacccgcgaacgtgccaccgatgtcaatcag
gaattgaacgaagtcatcagcctcctgcacctgcctgccgaagatcgcacggtgttcgac
aaggcgatgaagcagtcacgtcacccgtttacgccggtgaccctgttttatgagctaacc
gaggaacagattgccgtactcgcagtcaacgagttccgtctgccggggctggatgtcgaa
ccgcagttcgtgcgcaattacccgctcggggcacacttcgcacactcgataggttacgtc
ggccgcatcaacgaaaaagaatccaagactcttgattccgtcgaataccgtggcactcaa
tctatcggcaagaccggcatcgaacgcttctacgaaccgcagctgcacggtcatgtcgga
tacgaggaagtggaaaccaacgctcagggccgcgtattgcgggtcctgaaacacaccgat
ccgatccccggcaaaaatattgtcctgagcctcgacatcaagctccaggaagccgccgaa
gcggcactgggtgatcgccgtggttcagtggttgcgctggacccctcgaccggcgaagtg
ctggccatggtcagcaacccgagcttcgaccccaatctgttcgtgaccggtatcagctcc
aaggaatattccgcgctgcgcgattccattgaccgtccgctattcaaccgcgtgctacgc
ggcctgtacgcgcccggttcgacgatcaagcctgaggtggcgattgccggactcgacgcc
ggcgtggtcacgcctcaaacccgcgtcttcgatcctggctactaccaactgccggacttc
gaccacaaataccgcaactggaaccacagcggcgacggctgggtggacatggatgcggcg
atcatgcgctccaacgacacctacttctacgacctggcgcacaagctcggcatcgatcgc
ctgcacgactacatggcgatgttcggcctcggcgaaaaagtctcgctcgacatgttcgaa
gaatctcccggcctgatgccgtctcaggcctggaagcgcgccacccgacgtcaggcctgg
ttccccggtgagacggtgatcctcggcataggccagggctacatgcaggtcacaccactg
caactggctcaggccactgcactgatcgccaacaaaggtgtgtggaatcgtccgcacctc
gccaaaaccgtcgacggcgtgccgccggtggacgagcatccgatgccgaacatcctgctc
aaggatccgcgcgactgggagcaggtcaaccacggcatgcagatggtgatgcacgacgcc
cggggtatcgcccgggcagccgcagccggtgcgcaataccgcatcgccggcaagagtggt
acggcgcaggtggtagcgatcaaacaaggcgagcgctacaaccgcgagaaaaccctcgag
cggcatcgtgacaatgccttgttcgtcggttttgccccggccgaacatcctaagatcgcg
atctcggtgatgattgaaaacggtgaggccggtggtcgagtcgcaggccccgtagtgagg
cagatcatggatgcctggctactcgaccaggacggtcacctcaagccgcaatacgcggcg
ccgaccaaggcaccgggcgatccacaggtttaa
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