Pseudomonas sp. HS6: JJN09_11125
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Entry
JJN09_11125 CDS
T09971
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pshs
Pseudomonas sp. HS6
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pshs03000
]
JJN09_11125
Transcription factors [BR:
pshs03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JJN09_11125
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_23
HTH_20
MarR_2
PBP_like_2
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
UQS17378
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Position
2417892..2418782
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AA seq
296 aa
AA seq
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MTIKQMRAFLAVAQSLSFAVACERLHLSQSALSLTIKALEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLIADWDNAEDEMRQRFSLQRGRVTLAAMPSFAGNLLPPILKTFRARYPNV
NVTVNDVINEQVLEMVRDRQVELGVAFEPMQNTSLTFTPLYKDRFVAVVPQDSPLALRTD
IDWQTLLQEPFITLQRPSTVRVMLEEHLQARGMKLPVEFESHQLATVGRMVASGLGVSAV
PALCAEQMRELGARCLTLHEPVVERAIGVLTDPGNELSAAAQALFDILKAEDLGRL
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaagcagatgcgcgcctttctcgccgtggcccagagcctgagttttgccgtg
gcctgcgagcgcctgcacctgtcgcaatcggcgctgagcctgaccatcaaggcgctggag
gaggggctgggcgggcgtctgttcagccgcaatacgcgcaatgtggcgctgaccccggaa
ggcgaatccctgctgccactggcccggcgcctgatcgccgattgggacaacgccgaagac
gaaatgcgccagcgcttcagcctgcaacgcgggcgagtgacgctggcggcgatgccgtcg
tttgccggcaatctgctgccgccgatcctcaagaccttccgtgcgcgttatccgaacgtc
aacgtgacggttaacgacgtgatcaacgagcaagtgctggaaatggtccgcgaccgtcag
gtggagctcggcgtggcgttcgagccgatgcagaacacctcgctgaccttcacacctctt
tataaggatcgcttcgtcgcggtggtgccacaggattcacccctggccctgcgcaccgac
atcgactggcagaccttgttgcaggaaccgttcatcaccctgcaacgaccgtccacggtt
cgggtgatgcttgaggagcacttgcaggcccggggcatgaaactgccggtggagtttgaa
agccatcaactggcgacggtcgggcggatggttgccagcgggctgggggtgagtgcggtg
ccggcgttgtgtgccgagcagatgagggagttgggcgcgcggtgtctgacgttgcatgaa
ccggtggtagagcgggcgattggcgtgttgactgatccggggaatgagttgtcggcggcg
gcgcaggcgctttttgacattctcaaggctgaggatttgggtcgtctctga
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