Pseudomonas sp. HS6: JJN09_12160
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Entry
JJN09_12160 CDS
T09971
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pshs
Pseudomonas sp. HS6
Pathway
pshs02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pshs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JJN09_12160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshs02000
]
JJN09_12160
02044 Secretion system [BR:
pshs02044
]
JJN09_12160
Transporters [BR:
pshs02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
JJN09_12160
Secretion system [BR:
pshs02044
]
Type I secretion system
Adhesin protein transporter
JJN09_12160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UQS18165
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All DBs
Position
2668672..2670951
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AA seq
759 aa
AA seq
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MDQPIPSSPVNTQDTLLACVSWLCDHYRVGRSRQALTAGLPKARLLTPSLALASLSNAGL
GAGLVERRAHALPVQLVPLILLRKDHGGCILLGRHTAADEKGKRGFLYSVILPEISLEPV
ELTQTDIDELYAGFAILARLTAKVDTRAGEELARPAGHWLLSTLWRYRRYYRSAAIGAVL
INILALASIFFTMNVYDRVVPNQAFVTLWSLAIGVVVAMVFEAIARYVRAHLLDVAGKKA
DLVLGTLLFRQALSIRMEHKPASSGSFANQLREFESVRDFATSATLAAISDLPFVVMFVA
VIFVIAGPLGWIPLLLIPLIVGISVIIQWPLARTMKENLRESSLKQGVLIESVEGLETLK
AVGGEAYMQRRWESFSALAAGTSMKSRELMSMATGAVAFFQQIQTVALIVVGVYLIDAGD
LTMGALIATVMLAGRATAPLGQVVGLAVRFQQAKAALQSLNSLMALPVDRDSAREYLAKP
TIKGQLTLKDVGFAYPAPPMQPNPPVLQGINLSIEAGEQVAILGRIGSGKSTLLRVMARL
YSPVAGQMFSSGLDVNQIDPADWRTAVGYVGQDARLFYGSLRENVMIGRPEASADEFLRV
LRLSGLDQIVARHPQGINLPIGEMGEGLSGGQRQLVSLARTLLACPGLLLLDEPTSAMDT
QTEALFLQHLQRATQGQTLVVVTHRPSLLALVQRIVVVEDGKVVADGPKDTILAAMKANT
RKPDVTHRPAAGNAMSVNARRTRPPSAKASDTPTSQVTP
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
ctggatcaacccatcccttcgtcgccagtaaacacccaggacaccctgctggcgtgtgtc
tcgtggctgtgtgatcactacagggtagggcgctctcggcaggcactcactgcaggcttg
ccaaaagcacgcctgctgaccccttcgctggcactggcgagtctttccaatgcaggcctt
ggcgccgggctggtcgagcgccgggcccatgcattaccggtgcagctggtgccgctgatt
ctgctgcgcaaggatcacggcggctgcattttgctggggcggcacaccgctgcagatgaa
aagggcaagcgcgggtttctctacagcgtgatccttcccgagatcagtcttgaaccggtc
gaacttactcaaactgacatcgacgagctgtacgccggcttcgccattcttgccaggctc
acggccaaggtcgacacgcgtgccggtgaagaactggcgcggccagccggccattggctg
ttgagcactttgtggcgctatcgtcgttattaccgcagtgccgccatcggtgcggtgttg
atcaacatcctggccctggccagcattttcttcaccatgaatgtgtacgaccgcgtcgtg
cccaaccaggcgttcgtgaccctttggtcactggccatcggtgttgtcgtagccatggta
tttgaggccatcgcccgttatgtgcgtgcccatttactggatgtggcagggaagaaggcc
gatctggtgttgggtactttgttgttccgccaggccctgtcaatccggatggagcacaaa
ccagcgtcttccggatccttcgccaaccagttgcgagaattcgagtcggtgcgcgatttc
gcaacgtcggcaacgctggcggcgatttcggacttgccctttgtggtgatgttcgtcgcc
gtgatcttcgtcatcgccggtccgttgggctggattccgttgttgctgatcccgttgatc
gtcggcatcagcgtcattatccagtggccgctggcccgaaccatgaaggaaaacctgcgc
gagtcctcactcaagcaaggcgtgctgattgagtcggtggaggggctggaaactctcaag
gcggtcggtggcgaagcctacatgcagcgtcgctgggaaagcttcagtgccctggcggcc
ggaacctccatgaagtcgcgggaactgatgagcatggccaccggtgcggtcgcgttcttt
cagcagatccagactgtggcgctgattgtggtcggcgtctatttgatcgatgcgggtgac
ctgaccatgggtgcgttgatcgccacggtgatgctcgccggtcgtgcaaccgcaccgttg
ggacaggtggtgggtttggcagtgcgctttcagcaagcgaaggcggccttgcagtcgctc
aatagcttgatggcgttgccagtggatcgcgatagcgctcgtgagtacctggccaaaccg
acgatcaaaggccaactgaccttgaaagacgttggttttgcttacccggcaccgcccatg
cagcccaatccgccggtgctgcaaggcatcaacctgagcattgaagccggtgagcaggtc
gccattctcgggcgtatcggcagcggtaaatccacgctgctgcgggtcatggcgcgcctt
tattctccggtcgccgggcaaatgttcagttccggactggacgtcaatcagatcgacccg
gccgactggcgaacggcggtcggttacgttgggcaggatgcacggctgttttacggttcg
ctgcgcgagaacgtgatgatcggtcgccctgaagccagtgccgatgagttcctgcgggtc
ttgcgcttgagtgggctggaccagattgtcgcgcgccatccgcaaggcatcaacctgccg
atcggcgagatgggcgaaggcctgtcgggtggtcaacggcaactggtgtccctggcgcgt
acgctgttggcctgtcccgggttgctgctgttggatgagcctaccagtgccatggacacc
cagaccgaagcactgtttttgcagcacctgcagcgggccacgcaggggcaaaccctggtg
gtggtcacccaccgtccctcgttgctggcattggtccagcgcatcgtggtggtcgaagac
ggcaaggtcgtggccgatggtcccaaggacaccattctcgccgcgatgaaggccaacacc
cgcaaaccggacgttacgcatcgtcccgccgctggcaacgcgatgtccgtcaatgctcgc
aggaccagaccgccgtctgcaaaggccagcgatacaccgacctcgcaggtgacgccatga
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